nf-core-hlarnaseq

Validate nf-core/hlarnaseq changes by running available nf-core, nf-test, remote Nextflow testdata via run_tests_remote, and pre-commit checks; review plan compliance; and write artifacts/3_validate.md with findings and residual risks.

Implement an approved one-iteration plan for nf-core/hlarnaseq using Nextflow DSL2, Python, or R as appropriate. Preserves nf-core conventions, updates coordinated schema/docs/tests, and writes artifacts/2_implement.md.

Create a small, reviewable one-iteration plan for nf-core/hlarnaseq. Use for features, fixes, refactors, module additions, parameter changes, docs updates, or test work. Saves artifacts/1_plan.md and stops for human approval.