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Guide gene list enrichment analysis using over-representation and GSEA approaches.
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| name | pathway-enrichment |
| description | Guide gene list enrichment analysis using over-representation and GSEA approaches. |
Perform pathway enrichment analysis on gene lists.
# Pathway Enrichment: [contrast]
## Methods
- Tool: ...
- Database: ...
- Background: ...
- Adjusted p-value threshold: ...
## Top Enriched Pathways
| Pathway | Database | Gene Ratio | P-value | Adj P-value | Genes |
## Visualization
- Dot plot
- Bar plot
- Enrichment map (if network analysis performed)
Save to outputs/pathway-enrichment-<slug>.md.