bioskills-co-accessibility

name	bioskills-co-accessibility
description	Infer cis-regulatory peak-peak (and peak-gene) co-accessibility connections from scATAC data using Cicero, ArchR, or SCENIC+, with Hi-C concordance validation.
domain	single-cell
primary_tool	cicero
methods	["cicero","monocle3","archr","scenicplus","signac","genomicinteractions"]
macro_tags	["co-accessibility","cis-regulatory","enhancer-promoter","scatac","metacell"]
micro_tags	["cicero","graphical-lasso","lsi","umap","make_cicero_cds","run_cicero","addCoAccessibility","scenicplus","genomicinteractions","hiccups"]
source	bioskills-co-accessibility
status	active
enabled	true

Bioskills Co Accessibility