Científicos biológicos, todos los demás

Ciencias de la vida, físicas y sociales · Habilidades y competencias laborales · SOC 19-1029 · 16.801 skills

Contexto de la ocupación

Estas tareas de O*NET describen la ocupación y aportan contexto a la asignación SOC; no significan que cada Skill de la lista realice todas las tareas.

Develop new software applications or customize existing applications to meet specific scientific project needs.
Communicate research results through conference presentations, scientific publications, or project reports.
Create novel computational approaches and analytical tools as required by research goals.

Las tareas de O*NET se muestran en su idioma de origen (inglés). Los datos de tareas se han extraído de O*NET® 29.1 Database de USDOL/ETA y se utilizan bajo CC BY 4.0.

Fuentes representativas

Una muestra limitada de Skills populares asignadas a esta ocupación, con un máximo de una por repositorio de GitHub. A continuación aparece la lista completa.

NousResearch/hermes-agent

Gateway to 400+ genomics and computational biology skills.

nexu-io/open-design

A lab-meeting deck on gut-microbiome links to sleep quality — the design, the results, the caveats, and the next experiment. Built as a decision-grade academic research deck for lab group, PI.

cli-anything-unimol-tools

HKUDS/CLI-Anything

Interactive CLI for Uni-Mol molecular property prediction training and inference workflows.

13c-metabolic-flux

K-Dense-AI/scientific-agent-skills

Estimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps, mfapy isotope simulation, constrained multistart fitting, and flux-profile diagnostics. Use for 13C-MFA, carbon tracing, mass isotopomer distributions (MDVs/MIDs), positional isotopomers, parallel tracer experiments, and determining whether labeling data constrain a pathway flux. Distinguishes measured-label inference from COBRA flux balance analysis and flags experiments requiring nonstationary MFA.

Todas las Skills asignadas

Explora la asignación completa por popularidad del repositorio o actividad reciente de la fuente.

Los nombres y las descripciones conservan el idioma proporcionado por el repositorio de origen.

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NousResearch/hermes-agent

Gateway to 400+ genomics and computational biology skills.

NousResearch/hermes-agent

Drug discovery: ChEMBL search, drug-likeness, interactions.

nexu-io/open-design

A lab-meeting deck on gut-microbiome links to sleep quality — the design, the results, the caveats, and the next experiment. Built as a decision-grade academic research deck for lab group, PI.

cli-anything-unimol-tools

HKUDS/CLI-Anything

Interactive CLI for Uni-Mol molecular property prediction training and inference workflows.

13c-metabolic-flux

K-Dense-AI/scientific-agent-skills

Estimates intracellular metabolic fluxes from steady-state carbon-13 isotope-tracing measurements using validated atom maps, mfapy isotope simulation, constrained multistart fitting, and flux-profile diagnostics. Use for 13C-MFA, carbon tracing, mass isotopomer distributions (MDVs/MIDs), positional isotopomers, parallel tracer experiments, and determining whether labeling data constrain a pathway flux. Distinguishes measured-label inference from COBRA flux balance analysis and flags experiments requiring nonstationary MFA.

K-Dense-AI/scientific-agent-skills

Looks up precomputed AlphaGenome Atlas effects for any GRCh38 single-nucleotide variant (AVI score with Phred and 18 SHAP feature attributions, plus raw and quantile scores for RNA-seq, DNase, ATAC, ChIP-TF, ChIP-histone, CAGE, PRO-cap, splicing, polyadenylation and contact-map tracks), scores variants or scans windows on demand with the AlphaGenome model for human and mouse (variant scoring, in silico mutagenesis, REF-versus-ALT track prediction), and builds Atlas website deep links. Use when the user mentions AlphaGenome, AlphaGenome Atlas, AVI or AlphaGenome Variant Impact, DeepMind variant effect prediction, or wants to prioritise or mechanistically interpret non-coding, regulatory, splicing, enhancer, promoter, or chromatin-accessibility effects of SNVs from a VCF, credible set, or region. Research use only; not a clinical tool.

K-Dense-AI/scientific-agent-skills

Analyzes pooled CRISPR screen FASTQ reads and guide-count matrices with MAGeCK, validates guide libraries and contrasts, measures replicate and library QC, and produces gene hit rankings with effect sizes and FDR. Use for new knockout, CRISPRi, or CRISPRa screen analysis, enrichment or depletion contrasts, and MAGeCK count/test workflows; existing public dependency-score lookup belongs to DepMap.

K-Dense-AI/scientific-agent-skills

Converts neuroscience acquisition data to Neurodata Without Borders files with NeuroConv and PyNWB, preserves metadata and timebases, checks evidence-based clock alignment, and produces schema validation, NWB Inspector findings and round-trip checks. Use for NWB conversion and synchronization of planar single-channel two-photon TIFF imaging plus timestamped behavioral position CSV; this skill does not perform spike sorting or claim tested support for arbitrary acquisition formats.

K-Dense-AI/scientific-agent-skills

Designs and audits PCR and RT-qPCR primers with Primer3, explicit thermodynamic conditions, reference-based off-target amplification searches, and traceable sequence coordinates. Use for designing primer pairs, checking existing primers, exon-junction or isoform-specific assays, variant masking, cloning tails, multiplex compatibility, and interpreting Primer-BLAST results. Includes bounded local in-silico PCR and BLAST screening; distinguishes computational candidates from experimentally validated assays.

K-Dense-AI/scientific-agent-skills

Simulates biochemical kinetic models from SBML or Antimony with Tellurium and libRoadRunner, checks model units, compares deterministic parameter perturbations, and exports and replays SBML plus SED-ML COMBINE archives. Use for reaction-network time courses, kinetic parameters, concentration dynamics and reproducible simulation experiments; steady-state constraint-based metabolic flux analysis belongs to cobrapy.

nextflow-development

anthropics/knowledge-work-plugins

Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.

scientific-problem-selection

anthropics/knowledge-work-plugins

This skill should be used when scientists need help with research problem selection, project ideation, troubleshooting stuck projects, or strategic scientific decisions. Use this skill when users ask to pitch a new research idea, work through a project problem, evaluate project risks, plan research strategy, navigate decision trees, or get help choosing what scientific problem to work on. Typical requests include "I have an idea for a project", "I'm stuck on my research", "help me evaluate this project", "what should I work on", or "I need strategic advice about my research".