dependency-and-decompilation-analysis

name	dependency-and-decompilation-analysis
description	Rules for discovering, analysing, and classifying missing dependencies during MuleSoft flow analysis. Covers JAR/Java decompilation, Maven dependency analysis, custom module classification, and what blocks migration.

Skill: Dependency and Decompilation Analysis

Purpose: Authoritative rules for discovering and classifying dependencies during MuleSoft flow analysis. Follow exactly.

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1. Dependency Discovery

Call migration_listArtifacts with category="custom-code" to find all .jar, .java, .dwl, .xml, .raml, .properties, .yaml files.

Also examine:

• pom.xml for Maven dependencies — especially those with classifier=mule-plugin (Mule connectors).
• mule-artifact.json for exported resources and class loader settings.
• src/main/java/ for custom Java classes.
• src/main/resources/ for DataWeave modules (.dwl), property files, and API specs.

1.1 Mandatory Coverage Guardrails [NO FALSE NEGATIVES]

1. Build the dependency candidate list from artifact inventory and source references, not from a root-folder file loop.
2. Do NOT assume "all root .jar files were decompiled" means dependency analysis is complete.
3. Treat any class/library referenced by flow-used code as a dependency candidate until explicitly resolved.
4. If a referenced library cannot be located in scanned source artifacts or pom.xml, mark it missing (fail-closed).

Anti-pattern to avoid:

• Scanning only the workspace root for .jar files and concluding dependency closure from that result.

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2. Java Class / JAR Analysis Procedure

2.1 When to Decompile

Do NOT blindly decompile every .jar in the source folder. Instead, decompile on demand when a JAR/class reference is encountered during analysis:

• A Mule flow references a custom Java component (transformer, message processor, interceptor)
• A DataWeave expression calls a Java function
• A pom.xml dependency with classifier=mule-plugin has no standard Logic Apps equivalent
• A class is imported but its .java source is not in src/main/java/

2.2 How to Decompile

When you decide a JAR needs decompilation:

1. If .java source files exist under src/main/java/, read them directly — no decompilation needed.
2. For JAR files without source, attempt decompilation:
   • Run cfr <JarPath> --outputdir out/__decompiled__/<JarName>/ in the terminal.
   • Alternatively, use jar xf <JarPath> to extract and then decompile .class files.
3. ALWAYS write decompilation output to out/__decompiled__/ in the current migration workspace directory. NEVER write to the source folder or any other external location.
4. Read the decompiled .java files to understand classes, methods, and business rules.
5. If decompilation fails (obfuscated, native), mark it as a critical missing dependency.

2.3 Recursive Dependency Tree Resolution [IMPORTANT]

After decompiling a JAR, inspect what IT depends on and walk the full tree:

1. Read the decompiled code — look for import statements, type references, and method calls that reference other libraries.
2. For each referenced library, check if it exists in the source folder (as .jar, .java, or in pom.xml).
3. If it is a .jar in the source folder but not yet decompiled — decompile it too (repeat from §2.2).
4. If that child JAR itself references more JARs — continue recursively.
5. Stop recursion when a dependency is:
   • Already decompiled, OR
   • A standard Mule/Java runtime library (org.mule.*, java.*, javax.*), OR
   • Not found in the source folder → mark as missing dependency.

2.4 Decompilation Checklist

Before moving to dependency classification, confirm:

• Every JAR referenced by flow artifacts has been decompiled (or its source code is available)
• Every child JAR discovered inside decompiled code has also been traced recursively
• Custom transformers, message processors, and interceptors are fully understood
• Shared utility classes referenced by multiple flows are catalogued

2.5 Verification Gates Before "No Missing Dependencies"

You MUST pass all gates below before storing an empty missingDependencies array:

1. Reference-to-artifact gate: every non-runtime import/type referenced by flow-used classes maps to one of:
   • source code present, OR
   • decompiled JAR present, OR
   • explicit missing dependency entry.
2. Instantiation/call-site gate: if code contains constructor calls or casts to external types (e.g., new CustomService(), (ICustomService)factory.create()), the implementing library is mandatory.
3. Import/type gate: an import of a custom package with no resolvable artifact is NOT ignored; it must be justified as unused by symbol-level evidence or marked missing.
4. Flow relevance gate: unresolved dependencies in code paths executed by the analyzed flow are migrationRelevant=true; if they block non-stub implementation, set severity=critical and blocksMigration=true.

If any gate fails, do NOT return zero missing dependencies.

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3. Source vs Decompiled Precedence

• If the source code (.java, .dwl files) for a referenced class/module is PRESENT in the scanned source folder (listed as dependency artifacts), do NOT mark it as a missing dependency — the conversion agent can use the source code directly.
• Only mark a dependency as missing when NEITHER source code NOR understandable decompiled code is available.
• Presence of a package/import reference alone does not resolve dependency status; resolution requires source/decompiled implementation availability.

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4. What Counts as Missing

• JAR files whose source code is NOT found in the source folder.
• Custom Mule connectors (non-standard mule-plugin dependencies) without source.
• Custom Java components (transformers, message processors, interceptors) without source.
• External RAML/OAS API specifications not present in the project.
• DataWeave modules imported from external libraries not present locally.
• Third-party connector dependencies without a Logic Apps equivalent and no source code.
• MuleSoft Enterprise connectors that require specific licensing (SAP, Salesforce, etc.) — flag as needing equivalent Azure connectors.
• Configuration/certificates/connection strings needed for target environment.
• Anypoint Platform dependencies (API Manager policies, Object Store V2, CloudHub properties).

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5. Classification

Each missing dependency MUST have:

Field	Type	Description
id	string	Unique identifier
name	string	Dependency name
type	string	jar/java-class/dwl-module/connector/raml/schema/api-spec/property-file/custom-code/other
origin	string	standard-mule-runtime/standard-mule-connector/mulesoft-enterprise/third-party/custom/unknown
severity	string	critical/warning/info
referencedBy	array	Artifact names that reference this dependency
reason	string	Why it is needed
blocksMigration	boolean	True if prevents complete non-stub implementation
migrationRelevant	boolean	False for build-only or design-time-only dependencies (e.g. MUnit test dependencies)
resolution	string	MUST follow format: "Add the source code or binary for {name} to the migration source folder and re-run discovery." Do NOT suggest code changes or workarounds — the user must provide the missing artifact.

Also provide: summary (string), allCriticalResolved (boolean), counts ({ critical, warning, info }).

5.1 Fail-Closed Decision Rule

When evidence is incomplete or ambiguous, default to marking the dependency as missing with appropriate severity rather than reporting full resolution.

A "no missing dependencies" conclusion is valid only when all verification gates in §2.5 pass with explicit evidence.