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Standard scRNA-seq preprocessing and clustering with Scanpy: QC, filtering, normalization, HVG selection, PCA, neighbors, UMAP, and Leiden clustering, producing an analysis-ready AnnData object.
Codex または Claude でインストール この Prompt をコピーして Codex、Claude、または他のアシスタントに貼り付けると、Skill ページを確認してインストールできます。
SOC 職業分類に基づく
| name | bioclaw-scrna-preprocessing-clustering |
| description | Standard scRNA-seq preprocessing and clustering with Scanpy: QC, filtering, normalization, HVG selection, PCA, neighbors, UMAP, and Leiden clustering, producing an analysis-ready AnnData object. |
| domain | single-cell |
| primary_tool | scanpy |
| methods | ["scanpy","anndata","leiden","umap","pca"] |
| macro_tags | ["single-cell","scrna-seq","preprocessing","clustering","dimensionality-reduction","workflow"] |
| micro_tags | ["scanpy","anndata","leiden","umap","pca","data-io","var-names","qc","qc-metrics","violin-plot","filtering","doublet-removal","thresholds","normalization","log1p","highly-variable-genes","scaling","neighbors","clustering","export","h5ad","qc-report"] |
| source | bioclaw/scrna-preprocessing-clustering |
| status | active |
| enabled | true |
Load BioMaster as one integrated skill-driven bioinformatics assistant.
BioMaster conversational bioinformatics assistant; starts workflows only after execution intent or empty activation.
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