メニュー
Detect and remove doublets from scRNA-seq data using Scrublet (Python), DoubletFinder (R), or scDblFinder (R).
Codex または Claude でインストール この Prompt をコピーして Codex、Claude、または他のアシスタントに貼り付けると、Skill ページを確認してインストールできます。
SOC 職業分類に基づく
Load BioMaster as one integrated skill-driven bioinformatics assistant.
BioMaster conversational bioinformatics assistant; starts workflows only after execution intent or empty activation.
Automated and marker-guided single-cell cell type annotation using CellTypist, marker review, reference transfer, and confidence-aware label curation.
Ligand-receptor communication inference in single-cell or spatial data with sender-receiver summaries and cautious interpretation.
Workflow for paired or integrated single-cell RNA and ATAC analysis with multimodal latent spaces and regulatory interpretation.
Workflow for spatial transcriptomics preprocessing, domain detection, deconvolution, neighborhood analysis, and publication-ready spatial maps.
| name | bioskills-bioskills-single-cell-doublet-detection |
| description | Detect and remove doublets from scRNA-seq data using Scrublet (Python), DoubletFinder (R), or scDblFinder (R). |
| domain | single-cell |
| primary_tool | scrublet |
| methods | ["scrublet","doubletfinder","scdblfinder","scanpy","seurat"] |
| macro_tags | ["doublet-detection","qc","preprocessing"] |
| micro_tags | ["scrublet","doubletfinder","scdblfinder","scanpy","seurat","pann","parameter-sweep","thresholding"] |
| source | bioskills-bioskills-single-cell-doublet-detection |
| status | active |
| enabled | true |
