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For working with any terms in the catalytic activity branch; these often correspond to RHEA or EC terms
デフォルトでは、最初にソースを確認する Prompt が選択されています。直接コマンドに切り替えるか、ローカルコピーをダウンロードすることもできます。
インストールを決める前に、SKILL.md と SkillsMP に表示されている付属ファイルをお読みください。
Codex または Claude でインストール この Prompt をコピーして Codex、Claude、または他のアシスタントに貼り付けると、Skill ページを確認してインストールできます。
直接コマンドでは確認用 Prompt が省略されます。実行前にソースを確認してください。
npx skills add https://github.com/geneontology/go-ontology --skill reactionコマンドは1行のまま表示されます。コピー前に横へスクロールして全体を確認してください。
ローカルで確認しますか？SkillsMP が現在取得できるファイルをダウンロードできます。
Use whenever you run a Makefile target (e.g. `make travis_build`, `make test`, `make reasoned.ofn`) or any one-off ROBOT / owltools / dosdp-tools / scala-cli command derived from a Makefile recipe. These must run inside the pinned ODK Docker image, not against host tools. Covers validation, reasoning, imports, and release builds in src/ontology.
For reading, writing, debugging, or extending Soufflé Datalog (`.dl`) programs in this repo — the layered ontology QC program under `src/util/qc/`, the `basic-cycles.tsv` cycle check, taxon-constraint materialization, and the relation-diff CI report. Covers the RDF fact-file format these programs consume, this repo's Soufflé conventions, the check registry, and the required control-ontology self-test for any new or changed rule.
For reviewing a pull request against the GO ontology, whether from a local checkout or from the automated reviewer in CI. Covers what to check, how to grade severity, and how to report coverage honestly. Use whenever asked to review, critique, or check a PR or a diff to go-edit.obo.
SOC 職業分類に基づく
SKILL.md を表示中
| name | reaction |
| description | For working with any terms in the catalytic activity branch; these often correspond to RHEA or EC terms |
Reaction terms may have mappings that are qualified using skos (using source qualifiers), as in the following:
[Term]
id: GO:0000140
name: acylglycerone-phosphate reductase (NADP+) activity
namespace: molecular_function
def: "Catalysis of the reaction: 1-hexadecanoyl-sn-glycero-3-phosphate + NADP+ = 1-hexadecanoylglycerone 3-phosphate + H+ + NADPH." [RHEA:17341]
synonym: "1-acyldihydroxyacetone-phosphate reductase activity" EXACT []
synonym: "1-palmitoylglycerol-3-phosphate:NADP+ oxidoreductase activity" RELATED [EC:1.1.1.101]
synonym: "acyldihydroxyacetone phosphate reductase activity" RELATED [EC:1.1.1.101]
synonym: "palmitoyl dihydroxyacetone phosphate reductase activity" RELATED [EC:1.1.1.101]
synonym: "palmitoyl-dihydroxyacetone-phosphate reductase activity" RELATED [EC:1.1.1.101]
synonym: "palmitoyldihydroxyacetone-phosphate reductase activity" RELATED [EC:1.1.1.101]
xref: EC:1.1.1.101 {source="skos:exactMatch"}
xref: MetaCyc:ACYLGLYCERONE-PHOSPHATE-REDUCTASE-RXN {source="skos:exactMatch"}
xref: MetaCyc:RXN-15046 {source="skos:narrowMatch"}
xref: RHEA:17341 {source="skos:exactMatch"}
xref: RHEA:36175 {source="skos:narrowMatch"}
is_a: GO:0016616 ! oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28070" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28526" xsd:anyURI
Ideally there is a single source of truth for a reaction terms, which should be specified in the def xref