| name | facs-gating-viz-style |
| description | Beautify FACS gating plots for publication |
| version | 1.0.0 |
| category | Visual |
| tags | [] |
| author | AIPOCH |
| license | MIT |
| status | Draft |
| risk_level | Medium |
| skill_type | Tool/Script |
| owner | AIPOCH |
| reviewer | |
| last_updated | 2026-02-06 |
FACS Gating Viz Style
Beautify flow cytometry gating plots for publication.
Parameters
| Parameter | Type | Default | Required | Description |
|---|
--data, -d | string | - | Yes | FCS file path |
--style, -s | string | contour | No | Plot style (contour, density, dot) |
Usage
python scripts/main.py --data fcs_file.fcs --style contour
Features
- Contour plots
- Density visualization
- Publication-ready styling
Risk Assessment
| Risk Indicator | Assessment | Level |
|---|
| Code Execution | Python/R scripts executed locally | Medium |
| Network Access | No external API calls | Low |
| File System Access | Read input files, write output files | Medium |
| Instruction Tampering | Standard prompt guidelines | Low |
| Data Exposure | Output files saved to workspace | Low |
Security Checklist