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Scenario router for paper-writing tasks. Use after root triage to select paper submission, journal article, conference paper, grant proposal, lab report, group report, talk/workshop, or revision-response behavior.
Codex 또는 Claude로 설치 이 Prompt를 복사해 Codex, Claude 또는 다른 어시스턴트에 붙여 넣으면 Skill 페이지를 검토하고 설치를 진행할 수 있습니다.
SOC 직업 분류 기준
Skills for opening and driving agent-controllable visualization components in the Pantheon UI sidebar — interactive viewers the agent can open, control, and read back. Viewers: Vitessce (spatial / single- cell omics), Viv (bioimage / microscopy), volume3d (3D image volumes — MIP/ISO), spatial3d (3D spatial transcriptomics), Mol*, IGV, Gosling, Cytoscape, MSA, RDKit, phylotree, plus agent-generated apps.
General-purpose skills for data analysis infrastructure: workspace file organization, environment management, parallel computing, and performance.
Skills for single-cell and spatial omics data analysis. Best practices, code snippets, and workflows for the scverse ecosystem.
Aesthetic guidelines and output-type recipes for scientific figure production. Supports lightweight default-agent use through SKILL.md + one outputType recipe, with optional venue-specific style guides when requested.
Query the Virtual Embryo knowledge graph (mouse/human developmental biology: genes, anatomy, Theiler/Carnegie stages, gene expression, diseases, papers) and its 3D atlas catalog (anatomical OPT/light-sheet volumes + 3D spatial- transcriptomics datasets), and visualise those datasets in 3D with the volume3d / spatial3d live-view viewers. Public read-only HTTP API at https://kg.virtualembryo.ai — no auth, no key needed for reads. Use when the user asks about mouse/human embryo development, where a gene is expressed, an anatomical structure, a developmental stage, or wants to see/visualise the Virtual Embryo atlas or spatial-transcriptomics data.
Skills for rare disease case support: ontology-first normalization/retrieval and the clinical genetics consult report format contract (structure + theme). Load the relevant skill file when performing the matching task.
| id | paper_writing_scenarios |
| name | Paper Writing Scenario Router |
| description | Scenario router for paper-writing tasks. Use after root triage to select paper submission, journal article, conference paper, grant proposal, lab report, group report, talk/workshop, or revision-response behavior. |
| tags | ["paper_writing","scenarios","routing"] |
Scenario files decide the task shape. They do not write prose directly; they select workflow, format, theme, and quality gates.
| Scenario | File | Use when |
|---|---|---|
paper_submission | paper_submission.md | User asks for a manuscript or general paper submission |
journal_article | journal_article.md | User targets a journal or article type |
conference_paper | conference_paper.md | User targets a conference/workshop paper |
grant_proposal | grant_proposal.md | User asks for grant/proposal/funding application |
lab_report | lab_report.md | User asks for experiment/lab report |
group_report | group_report.md | User asks for group meeting, weekly report, progress report |
conference_talk | conference_talk.md | User asks for talk, speech, slides narrative, speaker notes |
workshop_share | workshop_share.md | User asks for workshop sharing, tutorial, reproducible notes |
revision_response | revision_response.md | User provides reviewer/editor comments or asks for rebuttal |
For every scenario, write the chosen IDs into triage.md before drafting.
