irahardianto/pathfinder

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<div align="center"> <img src="banner.jpeg" alt="Pathfinder" width="800" /> <h2 align="center">🧭 Pathfinder</h2> [![CI](https://github.com/irahardianto/pathfinder/actions/workflows/ci.yml/badge.svg?branch=main)](https://github.com/irahardianto/pathfinder/actions/workflows/ci.yml) [![DeepSource](https://app.deepsource.com/gh/irahardianto/pathfinder.svg/?label=code+coverage&show_trend=false&token=P_dCO6CVhJcHRXVQdoRMdPDE)](https://app.deepsource.com/gh/irahardianto/pathfinder/) [![CodeQL](https://github.com/irahardianto/pathfinder/actions/workflows/github-code-scanning/codeql/badge.svg?branch=main)](https://github.com/irahardianto/pathfinder/actions/workflows/github-code-scanning/codeql) [![Dependabot](https://badgen.net/badge/Dependabot/enabled/green?icon=dependabot)](https://dependabot.com/) [![SLSA Provenance](https://github.com/irahardianto/pathfinder/actions/workflows/slsa-provenance.yml/badge.svg)](https://github.com/irahardianto/pathfinder/actions/workflows/slsa-provenance.yml) <p align="center"> The Headless IDE — an MCP server that gives AI coding agents<br /> AST-aware code intelligence, semantic navigation, and LSP-backed discovery. <br /> <br /> <a href="#getting-started">Getting Started</a> · <a href="#agent-directives">Agent Directives</a> · <a href="#tools">View Tools</a> · <a href="https://github.com/irahardianto/pathfinder/issues">Request Feature</a> <br /> <br /> </p> </div>  ## About Pathfinder **Pathfinder** is an [MCP (Model Context Protocol)](https://modelcontextprotocol.io/) server written in Rust that gives AI coding agents the same code intelligence a human developer gets from an IDE — but without a GUI. Instead of treating source code as flat text, Pathfinder understands your code structurally through **Tree-sitter AST parsing** and semantically through **Language Server Protocol (LSP)** integration. This means AI agents can navigate, search, and explore code at the *symbol* level — functions, classes, methods — rather than fragile line-by-line string matching. ### Why Pathfinder? Traditional AI coding workflows suffer from: - **Blind navigation** — agents read entire files to find one symbol, wasting context. - **No semantic understanding** — flat text search returns hits in comments, strings, and dead code equally. - **Fragile path construction** — agents guess file structures instead of discovering them. Pathfinder solves these problems by providing: - 🌳 **AST-Aware Navigation** — jump to symbols using semantic paths (e.g., `src/auth.ts::AuthService.login`). - 🔍 **Semantic Search** — filter search results by AST context (code-only, comments-only, or all) powered by ripgrep + Tree-sitter. - 📡 **LSP-Powered Discovery** — go-to-definition, call hierarchy (incoming/outgoing), and real-time indexing status. - 🗺️ **Structural Mapping** — a token-budgeted repository skeleton that surfaces every symbol and its semantic path. - 🛡️ **Sandbox Security** — a 3-tier file access model prevents path traversal attacks and unauthorized file access. - 📊 **Built-in Observability** — per-engine telemetry (`ripgrep_ms`, `tree_sitter_parse_ms`, `lsp_ms`) and optional `--lsp-trace` for raw JSON-RPC debugging. ### Key Features - 🛠️ **3 MCP Tools** — high-precision resolution layer covering symbol location, relationship tracing, and source inspection (`locate`, `trace`, `inspect`). - 🌐 **8 Languages** — native Tree-sitter support for Go, Java, TypeScript, TSX, JavaScript, Python, Rust, and Vue SFCs. - 🏗️ **5 Rust Crates** — modular workspace architecture for clean separation of concerns. - ⚡ **Zero Configuration** — auto-detects languages and LSP servers in your workspace with probe-gated readiness.  ### Language Support & Conformance Tiers Language maturity is verified by the automated conformance suite (WS-9, 16 assertions C-1 through C-16): | Language | Tier | Conformance Score | AST Navigation (C-1..C-3, C-11..C-15) | LSP Resolution (C-4..C-10, C-16) | Product Thesis (C-6) | |---|---|---|---|---|---| | **Rust** | **Tier 1** (Full) | 16/16 | ✅ Verified | ✅ Verified | ✅ Verified | | **Go** | **Tier 1** (Full) | 16/16 | ✅ Verified | ✅ Verified | ✅ Verified | | **TypeScript** | **Tier 1** (Full) | 16/16 | ✅ Verified | ✅ Verified | ✅ Verified | | **Python** | **Tier 1** (Full) | 16/16 | ✅ Verified | ✅ Verified | ✅ Verified | | **Java** | **Tier 1** (Full) | 16/16 | ✅ Verified | ✅ Verified | ✅ Verified |   ## Getting Started ### Prerequisites - **Rust toolchain** (1.75+ recommended) — [Install via rustup](https://rustup.rs/) - **An MCP-compatible AI client** — such as [Antigravity](https://antigravity.dev/), Claude Desktop, Cursor, or any tool supporting MCP stdio transport. - **(Optional) Language servers** — for LSP navigation support (e.g., `gopls` for Go, `typescript-language-server` for TS/JS, `rust-analyzer` for Rust, `pyright` for Python). ### Installation Choose one of the following methods: **Homebrew (macOS & Linux):** ```sh brew tap irahardianto/pathfinder-mcp brew install pathfinder-mcp ``` **cargo install from crates.io:** ```sh cargo install pathfinder-mcp ``` **Build from source:** ```sh git clone https://github.com/irahardianto/pathfinder.git cd pathfinder cargo build --release # The binary will be at target/release/pathfinder-mcp ``` **Verify the installation:** ```sh pathfinder-mcp --help ``` **Contributing from source? Enable the git hooks (one-time):** ```sh git config core.hooksPath .githooks ``` This activates `pre-commit` (fmt/clippy/build/doc/test/security gates), `commit-msg` (Conventional Commits validation), and `pre-push` (integration test suite). See [Contributing](#contributing) for details and environment variable overrides. ### Configuration #### MCP Client Configuration Add Pathfinder to your MCP client's server configuration. The exact format depends on your client. **Example (JSON config for most MCP clients):** ```json { "mcpServers": { "pathfinder": { "command": "pathfinder-mcp", "args": ["/path/to/your/workspace"] } } } ``` **With LSP trace enabled (for debugging):** ```json { "mcpServers": { "pathfinder": { "command": "pathfinder-mcp", "args": ["--lsp-trace", "/path/to/your/workspace"] } } } ``` #### CLI Usage ``` pathfinder-mcp [OPTIONS] <WORKSPACE_PATH> Arguments: <WORKSPACE_PATH> Path to the workspace root directory Options: --lsp-trace Enable raw LSP JSON-RPC tracing to stderr (DEBUG level) -h, --help Print help -V, --version Print version ``` Pathfinder communicates over **stdio** using the MCP protocol. Logs are emitted as structured JSON to **stderr** (since stdout is reserved for MCP transport).  ## Agent Directives Pathfinder ships with a set of **agent directives** — pre-written rules and skills that teach your AI agent how to use Pathfinder tools correctly, reliably, and efficiently. Without these, the agent falls back to generic file-reading behaviour and misses most of Pathfinder's value. > **Why this matters:** An AI agent that doesn't know about semantic paths or which of `locate`/`trace`/`inspect` to reach for will make avoidable mistakes — calling a tool that no longer exists, constructing malformed semantic paths, or misreading a `null` evidence field as a confirmed zero. The directives encode all of this knowledge directly into the agent's system context. ### What's Included The directives live in [`docs/agent_directives/`](docs/agent_directives/) and mirror the rules and skills used during Pathfinder's own development: ``` docs/agent_directives/ ├── AGENTS.md # Always-on routing rule: which Pathfinder tool to use for each action ├── instructions.md # MCP server instructions: semantic path format, tool selection guide └── skills/ └── pathfinder/ └── SKILL.md # On-demand skill: concrete navigation workflows and error recovery ``` **`AGENTS.md`** — an always-on rule injected into every agent turn. It tells the agent: - To prefer Pathfinder's semantic tools over built-in text tools whenever possible - How to form correct semantic paths (e.g., `src/auth.ts::AuthService.login`) - Which tool to reach for each action (reading, searching, navigating) - When to fall back gracefully if Pathfinder is unavailable **`skills/pathfinder/SKILL.md`** — a detailed on-demand skill the agent activates when it needs deeper guidance. It covers: - The 3-tool surface (`locate`, `trace`, `inspect`) and each tool's key parameters - The dual-channel response model and the `ToolStatus`/`Confidence`/`Evidence` tri-state contract (`null` = unknown, `[]` = confirmed zero) - Token budget controls (`max_depth`, `max_references`, `max_dependencies`) and the graceful fallback to host tools ### Setup by Client #### Antigravity Copy the directives into your project's `.agents/` directory. Antigravity auto-discovers all rules and skills placed there: ```sh # From your project root (not the Pathfinder repo) mkdir -p .agents/skills cp /path/to/pathfinder/docs/agent_directives/AGENTS.md .agents/ cp -r /path/to/pathfinder/docs/agent_directives/skills/* .agents/skills/ ``` Optionally, copy the MCP server instructions for lightweight tool context on every session: ```sh cp /path/to/pathfinder/docs/agent_directives/instructions.md ~/.gemini/antigravity/mcp/pathfinder/instructions.md ``` The routing rule runs on every agent turn automatically (`trigger: always_on`). The workflow skill is activated on demand when the agent needs detailed guidance. The `instructions.md` is loaded by Antigravity alongside the tool schemas for lightweight per-session context. #### Claude Desktop / Cursor / Other MCP Clients For clients that support system prompt injection or custom instructions, paste the content of `AGENTS.md` into your **system prompt** or **custom instructions** field. Then reference `skills/pathfinder/SKILL.md` as additional context or attach it as a project document. For clients that support agent rule files (e.g., `.cursorrules`, `.clinerules`), you can drop the `AGENTS.md` content directly into those files. #### General Approach For any MCP-compatible client, the minimum effective setup is to inject the **AGENTS.md routing rule** into the agent's persistent context. This single file prevents the most common mistakes. The workflow skill is optional but significantly improves the quality of complex multi-step tasks.  ## Tools Pathfinder exposes exactly 3 high-precision MCP tools. Every tool operates within the workspace sandbox and returns structured JSON responses with dual-channel human-readable text. ### 🧭 Navigation, Tracing & Inspection | Tool | Description | |---|---| | `locate` | Jump to a symbol's definition, or resolve a file+line to its semantic path. Two auto-detected modes: provide `semantic_path` for definition lookup, or `file`+`line` for semantic path resolution. Supports batch lookups (`locations`). LSP-powered with ripgrep fallback. | | `trace` | Trace a symbol's relationships — callers/callees, all references, or full overview. Three scopes: `callers` (call hierarchy), `references` (all usages including imports, type annotations), `overview` (combined source + callers + callees + references). Essential for understanding blast radius before refactoring. | | `inspect` | Extract a symbol's source code by semantic path, optionally with its dependency graph. Supports batch extraction (`semantic_paths`). Default: source only (fast, Tree-sitter). With `include_dependencies=true`: also fetches callee signatures (LSP-powered). |  ## Architecture Pathfinder is structured as a Rust workspace with 5 crates, each with a clear responsibility: ``` pathfinder/ ├── crates/ │ ├── pathfinder/ # MCP server, CLI, tool routing │ │ └── src/ │ │ ├── main.rs # CLI entry point (clap) │ │ ├── server.rs # MCP tool router (3 consolidated tools) │ │ └── server/ │ │ ├── types.rs # Parameter & response types (contracts 1-5) │ │ ├── helpers.rs # Dual-channel formatting & validation │ │ └── tools/ # Core tool handlers │ │ ├── inspect.rs # inspect tool handler (single & batch) │ │ ├── semantic_path.rs # locate(file+line) handler │ │ └── navigation/ # LSP-backed navigation │ │ ├── definition.rs # locate tool handler │ │ ├── impact.rs # trace(scope=callers) handler │ │ ├── references.rs # trace(scope=references) handler │ │ ├── overview.rs # trace(scope=overview) handler │ │ ├── deep_context.rs # inspect(include_dependencies) handler │ │ └── grep_support.rs # Navigation fallback search │ │ │ ├── pathfinder-common/ # Shared types, ToolStatus, Evidence<T>, config, sandbox │ ├── pathfinder-treesitter/ # The Surgeon — AST parsing, symbol extraction, containment │ ├── pathfinder-search/ # The Scout — internal ripgrep search engine & matchers │ └── pathfinder-lsp/ # The Lawyer — LSP client, probe-gated readiness, process supervisor ``` │ ├── docs/ │ ├── agent_directives/ # AI agent rules and skills │ ├── requirements/ # PRD and specifications │ ├── research_logs/ # Design decisions and research │ └── audits/ # Code audit findings │ ├── Cargo.toml # Workspace manifest ├── LICENSE # MIT License └── README.md ``` ### The Three Engines Pathfinder internally delegates work to three specialized engines, each abstracted behind a trait for testability: | Engine | Crate | Trait | Responsibility | |---|---|---|---| | **The Surgeon** | `pathfinder-treesitter` | `Surgeon` | AST parsing, symbol extraction, semantic path resolution, repo map generation | | **The Scout** | `pathfinder-search` | `Scout` | Ripgrep-powered full-text search with Tree-sitter enrichment for AST-aware filtering | | **The Lawyer** | `pathfinder-lsp` | `Lawyer` | LSP process lifecycle, go-to-definition, call hierarchy, references, and go-to-implementation navigation | Each engine can be mocked independently for unit testing, and the server gracefully degrades when an engine is unavailable (e.g., falls back to Tree-sitter heuristics when no LSP is running). ### Core Concepts #### Semantic Paths Pathfinder identifies code symbols using semantic paths — a human-readable notation that mirrors how developers think about code structure: ``` src/auth.ts::AuthService.login # Method src/utils/math.go::CalculateDiscount # Function lib/models.py::User # Class ``` Format: `<relative_file_path>::<Symbol>[.<Method>]` #### Version Hashes Every file read returns a `version_hash` (SHA-256 digest of the file content). This is a content fingerprint that agents can use to detect when a file has changed between reads — useful for coordinating multi-step workflows and detecting concurrent modifications. ### Supported Languages #### Tree-sitter Support (Built-in, Zero Configuration) Tree-sitter grammars are compiled directly into the Pathfinder binary — no external tools needed. All symbol extraction, semantic path resolution, and AST-aware filtering work out of the box. | Language | Extension(s) | Notes | |---|---|---| | Go | `.go` | Function, interface, struct, and type alias extraction | | Java | `.java` | Class, interface, enum, record, and method extraction with inner class hierarchy | | TypeScript | `.ts` | Class, function, arrow function, interface, and type extraction (also handles `.mts`) | | TSX | `.tsx` | All TypeScript symbols **plus** JSX element extraction as child symbols | | JavaScript | `.js`, `.jsx`, `.mjs`, `.cjs` | Functions, classes, JSX elements in `.jsx` files, and ES/CommonJS modules (`.mjs`, `.cjs`) | | Python | `.py` | Function, class, and method extraction | | Rust | `.rs` | Functions, structs, enums, traits; `impl` block methods merged under their parent type | | Vue SFC | `.vue` | **Multi-zone**: `<script>` parsed as TypeScript (AST-aware), `<template>` and `<style>` accessible for text search | #### LSP Support (Optional, Auto-detected) Pathfinder automatically detects which language servers are available in your workspace by scanning for marker files (`Cargo.toml`, `go.mod`, `tsconfig.json`, etc.). LSP processes start eagerly in the background (warm start) and are shut down after an idle timeout. To maximise navigation coverage, install the language server(s) for your project: | Language | LSP Server | Install Command | Auto-detect Marker | |---|---|---|---| | **Rust** | `rust-analyzer` | `rustup component add rust-analyzer` | `Cargo.toml` at workspace root | | **Go** | `gopls` | `go install golang.org/x/tools/gopls@latest` | `go.mod` (scans up to depth 2) | | **TypeScript / JavaScript / Vue** (including `.mjs`, `.cjs`, `.mts`, `.cts`) | `typescript-language-server` | `npm install -g typescript-language-server typescript` | `tsconfig.json` or `package.json` (depth 2) | | **Python** | `pyright` | `npm install -g pyright` | `pyproject.toml`, `setup.py`, or `requirements.txt` (depth 2) | | **Java** | `jdtls` | [Eclipse JDT Language Server](https://github.com/eclipse-jdtls/eclipse.jdt.ls) | `pom.xml`, `build.gradle`, `build.gradle.kts`, `settings.gradle`, or `settings.gradle.kts` (depth 2) | > **Vue note:** Pathfinder handles Vue SFC parsing internally with Tree-sitter. The `typescript-language-server` validates the `<script>` block — no separate `volar` or `vue-language-server` installation is required. > **Concurrent LSP handling:** When Pathfinder detects a concurrent LSP instance (e.g., your IDE is already running `gopls`), it automatically isolates build caches to avoid lock contention. Isolated caches are stored under `.pathfinder/` in your project root, which is automatically added to `.gitignore`. Navigation tools automatically probe readiness and report `ToolStatus::NotReady` or `ToolStatus::Degraded` with actionable recovery guidance.  ## Observability Pathfinder emits structured JSON logs to stderr with per-engine timing breakdowns: ```json { "timestamp": "2026-03-31T05:30:00Z", "level": "INFO", "message": "search completed", "ripgrep_ms": 12, "tree_sitter_parse_ms": 45, "total_matches": 23, "duration_ms": 62 } ``` Enable `--lsp-trace` for full JSON-RPC request/response logging at DEBUG level — useful for diagnosing LSP communication issues.  ## Security Pathfinder implements a **3-tier sandbox model**: | Tier | Type | What It Blocks | |---|---|---| | **Tier 1** | Hardcoded Deny *(cannot be overridden)* | `.git/objects/`, `.git/HEAD`, `*.pem`, `*.key`, `*.pfx` — security-critical paths | | **Tier 2** | Default Deny *(overridable via config)* | `.env`, `node_modules/`, `vendor/`, `dist/`, `build/`, `__pycache__/` | | **Tier 3** | User-Defined | Patterns in `.pathfinderignore` (gitignore syntax) | - All file paths are canonicalized and validated before any I/O operation. - Path traversal attacks (e.g., `../../etc/passwd`) are rejected at Tier 1. - The `WorkspaceRoot` type enforces that only valid, existing directories are accepted as workspace roots. - Tier 2 patterns can be selectively overridden via `SandboxConfig.allow_override`; additional deny patterns can be added via `SandboxConfig.additional_deny`.  ## Roadmap - [x] Core MCP server with stdio transport - [x] Tree-sitter-powered AST parsing (Go, TypeScript, TSX, JSX, JavaScript, Python, Rust, Vue SFC) - [x] Vue Single-File Component multi-zone parsing (`<script>`, `<template>`, `<style>`) - [x] JSX/TSX element extraction as addressable child symbols - [x] Ripgrep search with AST-aware filtering (`code_only`, `comments_only`, `all`) - [x] Search intelligence: `known_files`, `group_by_file`, `exclude_glob` (E4) - [x] LSP integration for go-to-definition and call hierarchy navigation - [x] LSP lifecycle management (auto-start, crash recovery, idle termination) - [x] Proactive capability reporting via `explore` (`capabilities.lsp.per_language`) - [x] Two-phase LSP readiness model (navigation vs indexing) with probe-gated invariants - [x] Concurrent LSP cache isolation (Go, TypeScript, Python, Rust) - [x] Probe-based readiness fallback with TTL-cached results - [x] 3-tier sandbox security model - [x] Per-engine observability and telemetry - [x] `explore` temporal filtering (`changed_since`) and extension filters (E6) - [x] `read` with source_only/compact/symbols/full detail modes and line range filtering (E2) - [x] Pre-built binaries via Homebrew tap and cargo install - [x] Java language support (Tree-sitter + jdtls LSP integration) - [x] `trace(scope="references")` — LSP `textDocument/references` - [x] `trace(scope="callers")` — call hierarchy (renamed from `analyze_impact`) - [x] `search(mode="symbol")` — resolve bare symbol names to semantic paths - [x] `read(paths=[...])` — batch multi-file reading with per-file error resilience - [x] `trace(scope="overview")` — composite source + callers + callees + references - [x] `locate(file, line)` — convert file:line locations to semantic paths - [x] 14→7 tool consolidation for cleaner agent interface - [x] v6: 7→3 tool consolidation (`locate`, `trace`, `inspect`) with a dual-channel `ToolStatus`/`Confidence`/`Evidence` response contract - [ ] Additional language support (C/C++, C#, Kotlin, etc.) - [ ] Custom LSP server command overrides via configuration file  ## Contributing Contributions are welcome! Pathfinder follows strict engineering practices: 1. Fork the repository 2. Create your feature branch (`git checkout -b feature/amazing-feature`) 3. Commit your changes (`git commit -m 'feat: add amazing feature'`) 4. Push to the branch (`git push origin feature/amazing-feature`) 5. Open a Pull Request ### Development ```sh # Run tests cargo test --workspace # Run with clippy (pedantic + all-features, matches the pre-commit gate) cargo clippy --workspace --all-targets --all-features # Format cargo fmt --all --check # Dependency audit cargo deny check ``` > The workspace enforces `clippy::pedantic`, `warn(unwrap_used)`, `warn(expect_used)`, > `warn(missing_docs)`, and `deny(unsafe_code)`. Six structural lints — > `too_many_lines`, `cognitive_complexity`, `too_many_arguments`, > `type_complexity`, `struct_excessive_bools`, `large_enum_variant` — are > `deny`d at `priority = 1`: a new, unattributed violation fails the build on > its own. `deny` (not `forbid`) is deliberate — `forbid` conflicts with > proc-macros (`clap::Parser`, `async_trait`) that emit group-level > `#[allow(clippy::pedantic)]`/`#[allow(clippy::complexity)]` in their macro > expansions, which would otherwise hard-error with `E0453` workspace-wide. > This is defense-in-depth alongside the pre-commit hook's structural-suppress > gate (see below) and the no-`--no-verify` policy in > [git-workflow-principles.md](.agents/rules/git-workflow-principles.md). ### Git Hooks Pathfinder ships versioned git hooks in `.githooks/` (not `.git/hooks/`, which is local-only and untracked). Enable them once per clone: ```sh git config core.hooksPath .githooks ``` | Hook | Runs on | What it checks | |---|---|---| | `pre-commit` | every commit | secrets, structural-suppress ratchet, debug code, conflict markers, large files, lockfile discipline, `.agents/` integrity, typos, gitleaks, semgrep, `cargo fmt`/`clippy`/`build`/`doc`/`machete`/`deny`/`test`/`audit` | | `commit-msg` | every commit | [Conventional Commits](.agents/rules/git-workflow-principles.md) format (required by `release-plz.toml` for automated version bumps) | | `pre-push` | every push | the `--features integration` test suite (mock LSP subprocess, file watcher) — kept out of `pre-commit` to keep commits fast | All gates degrade gracefully: a gate whose toolchain isn't installed reports `SKIP`, never a false `FAIL`, so the hooks work on any contributor's machine from day one. Only the secrets scan and the staged-diff half of the structural-suppress gate are non-skippable — security-mandate.md always wins. **Environment variable overrides** (all optional): | Variable | Effect | |---|---| | `PATHFINDER_HOOK_SKIP=id1,id2` | Skip specific gates by id (e.g. `PATHFINDER_HOOK_SKIP=audit,semgrep`) | | `PATHFINDER_HOOK_FAST=1` | Skip the slow/networked gates (`rust-test`, `audit`) for large refactor branches | | `PATHFINDER_HOOK_RUN_ALL=1` | Ignore all skip flags — force every gate to run | | `PATHFINDER_HOOK_NO_COLOR=1` | Disable ANSI color output (CI / non-interactive shells) | | `PATHFINDER_HOOK_NO_ISOLATE=1` | Disable working-tree isolation (only if isolation itself misbehaves) | | `PATHFINDER_HOOK_SKIP_PUSH=1` | Skip the `pre-push` integration test suite | Bypassing with `git commit --no-verify` / `git push --no-verify` should not be routine practice (git-workflow-principles.md). The **structural-suppress** gate ratchets pre-existing `#[allow]`/`#[expect]` overrides on the six structural lints above against `.githooks/suppression-baseline.txt`: new suppressions are always rejected, and paying down existing debt is locked in by re-running: ```sh .githooks/update-suppression-baseline.sh ```  ## License Distributed under the MIT License. See the [LICENSE](LICENSE) file for details. --- <p align="center"> Built with 🦀 in Rust </p>

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Workflows and protocols for Pathfinder v6 semantic navigation tools (locate, trace, inspect). Covers: semantic addressing, dual-channel response model, tri-state evidence, budget controls, and error recovery.

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2026-08-23

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