bioconductor-enrichplot

name	bioconductor-enrichplot
description	The 'enrichplot' package implements several visualization methods for interpreting functional enrichment results obtained from ORA or GSEA analysis. It is mainly designed to work with the 'clusterProfiler' package suite. All the visualizati
when_to_use	Use when: Enrichment Visualization: Visualizing functional enrichment results (Over-Representation Analysis [ORA] or Gene Set Enrichment Analysis [GSEA]) generated by clusterProfiler, DOSE, meshes, or ReactomePA.; Network Plots: Creating advanced network plots (e.g., cnetplot to show gene-concept networks, emapplot for enrichment map plots).; GSEA Running Scores: Generating publication-ready GSEA running sc. Not for: For performing the actual enrichment calculations, use clusterProfiler or fgsea instead because enrichplot is strictly a visualization package.; For generic, non-biological network visualizations, use ggraph or igraph directly to avoid enrichment-spe
user-invocable	false

enrichplot

Dependencies & Environment

Package-intrinsic requirements from the Bioconductor landing page — reproduce in any R environment.

• Version: 1.32.0 · Bioconductor: 3.23 · R: ≥ 4.6
• Imports: aplot, DOSE, dplyr, enrichit, ggfun, ggnewscale, ggplot2, ggrepel, ggtangle, ggtree, GOSemSim, igraph, purrr, RColorBrewer, reshape2, rlang, scatterpie, tidydr, yulab.utils
• Install: BiocManager::install("enrichplot")