cherimoya

Train, evaluate, and use Cherimoya sequence-to-function genomic models with the `cherimoya` command-line tools or Python API. Use when a user wants to run the end-to-end pipeline, use a trained model to do downstream tasks, or troubleshoot a run. Designed for users who may be new to Cherimoya or to sequence modeling: ask clarifying questions whenever an input is ambiguous or missing, pick reasonable defaults, and explain in plain language what was chosen and why.