jfrog-reconcile-manifest

name	jfrog-reconcile-manifest
description	Reconcile JFrog Platform state with a desired-state manifest. Reads current configuration, computes a diff, presents changes for approval, and applies only the delta. Use when the user wants to update, sync, or reconcile JFrog with manifest changes.

JFrog Reconcile Manifest

Prefer jf api (../../../platform-features/skills/jfrog-cli/jf-api-patterns.md) after jf config; curl remains valid fallback for the same paths.

Given a manifest YAML describing the desired state, compare it against the current JFrog Platform state and apply only the differences -- after user approval.

Inputs

• manifest -- the desired-state manifest YAML, explicitly provided by the user (file path or parsed structure), following the schema in templates/manifest-template.yaml. This must be a path the user gave directly -- never auto-discover or use locally found manifest files.
• baseline -- (optional) a previously stored manifest YAML used as the baseline for comparison. If provided by the caller (e.g., the orchestration skill already downloaded it from the state backend), skip the retrieval in Phase 0. The baseline must always come from the configured state backend (Artifactory or git) -- never from a locally found file.
• All JFrog credentials (JFROG_URL, JFROG_ACCESS_TOKEN) must be loaded and validated before invoking this skill (handled by the orchestration skill's prerequisite checks)

Overview

The reconciliation operates as a 3-way comparison (similar to terraform plan) when a baseline manifest is available, or a 2-way comparison when it is not:

Baseline Manifest             Desired State (manifest)    Live State (JFrog APIs)
(last applied state)                  |                         |
        \                             |                         |
         +--- What changed in --------+                         |
              the manifest                                      |
                     \                                         /
                      +------------ Diff Engine --------------+
                                        |
                                 Change Summary
                            (manifest changes + drift)
                                        |
                                  User Approval
                                        |
                                   Apply Delta

• Baseline manifest = the last manifest that was successfully applied and persisted to the state backend (Artifactory or git). Think of it as the Terraform state file.
• Desired state = the new/edited manifest the user wants to apply now.
• Live state = the actual current configuration in the JFrog Platform (read from APIs).

When a baseline is available, the diff summary shows:

• Manifest changes: what the user intentionally changed (baseline vs. desired)
• Drift: what changed in the live platform since the last apply (baseline vs. live)
• Net actions: what operations are needed to bring live state to the desired state

When no baseline is available, the skill falls back to a 2-way comparison (desired vs. live), which is the standard behavior.

Phase 0: Retrieve Baseline Manifest (State File)

Before reading live state, check for a previously stored manifest to use as a baseline. This step is skipped if the caller already provides a baseline input.

0.1 Determine state backend

DESTINATION=$(yq -r '.state.destination // "artifactory"' "$MANIFEST_FILE")

0.2 Ask the user about baseline source

Present the user with a choice (use AskQuestion):

To produce an accurate change plan, I can compare your new manifest against a baseline (the last applied manifest stored in your state backend). Should I retrieve it?

Options:

• Retrieve from state backend (<artifactory|git> -- based on state.destination) -- retrieves the latest stored manifest automatically
• No baseline (skip) -- proceed with live-only comparison (2-way diff)

Important: The baseline must always come from the configured state backend (Artifactory or git). Do not offer or accept locally found files as baselines. Only the user-provided desired-state manifest and the stored state file are used in the comparison.

0.3 Retrieve from state backend

If the user chooses the state backend option, use the jfrog-system-config-repo skill:

Artifactory backend (state.destination = artifactory)

Run with required_permissions: ["full_network"].

STATE_PROJECT=$(yq -r '.state.artifactory.project // "system"' "$MANIFEST_FILE")
STATE_REPO=$(yq -r '.state.artifactory.repository // "system-configuration"' "$MANIFEST_FILE")

# Check if the state repo exists
jf api "/artifactory/api/repositories/${STATE_REPO}" >/tmp/rec-state-repo.json 2>/tmp/rec-state-repo.code
STATUS=$(tr -d '\r\n' < /tmp/rec-state-repo.code)

if [ "$STATUS" != "200" ]; then
  echo "INFO: State repository '${STATE_REPO}' does not exist. No baseline available."
  echo "Proceeding with live-only comparison."
  BASELINE_FILE=""
else
  # Use Operation B from jfrog-system-config-repo to get the latest manifest
  jf api "/artifactory/api/storage/${STATE_REPO}/" >/tmp/rec-storage.json 2>/dev/null
  LATEST_FOLDER=$(jq -r '[.children[]? | select(.folder==true) | .uri] | sort | last' /tmp/rec-storage.json)

  if [ "$LATEST_FOLDER" != "null" ] && [ -n "$LATEST_FOLDER" ]; then
    jf api "/artifactory/${STATE_REPO}${LATEST_FOLDER}/jfrog-configuration-manifest.yaml" \
      >/tmp/baseline-manifest.yaml 2>/dev/null
    echo "OK: Retrieved baseline manifest from ${STATE_REPO}${LATEST_FOLDER}"
    BASELINE_FILE="/tmp/baseline-manifest.yaml"
  else
    echo "INFO: No manifest snapshots found in '${STATE_REPO}'. No baseline available."
    BASELINE_FILE=""
  fi
fi

Git backend (state.destination = git)

Run with required_permissions: ["all"].

Use Operation E from jfrog-system-config-repo to clone the repo and retrieve the latest manifest snapshot. If found, save to /tmp/baseline-manifest.yaml.

0.4 Baseline loaded summary

After retrieval (or skip), report to the user:

• Baseline found: "Using baseline manifest from <source> (timestamp: <ts>). Changes will be shown as a 3-way comparison."
• No baseline: "No baseline manifest available. Changes will be computed against live JFrog state only (2-way comparison)."

Store the baseline (if any) as BASELINE_FILE for use in Phase 2.

Phase 1: Read Current State

For each project listed in the manifest, query the JFrog Platform to discover what currently exists. All API calls run with required_permissions: ["full_network"].

IMPORTANT: Prefer jf api (../../../platform-features/skills/jfrog-cli/jf-api-patterns.md). Follow the Safe API Call Pattern from the jfrog-platform rule -- never pipe API stdout directly to jq. Capture HTTP status and body separately (jf api writes status to stderr), check the status before parsing. Add sleep 1 between calls in loops to avoid rate limiting.

1.1 Projects

STATUS=$( (jf api "/access/api/v1/projects/$PROJECT_KEY" >/tmp/project-$PROJECT_KEY.json 2>/tmp/project-$PROJECT_KEY.code) ; tr -d '\r\n' < /tmp/project-$PROJECT_KEY.code )
# 200 = exists (details in temp file), 404 = does not exist
if [ "$STATUS" = "200" ]; then
  jq . /tmp/project-$PROJECT_KEY.json
fi

1.2 Repositories

HTTP_CODE=$( (jf api "/artifactory/api/repositories?project=$PROJECT_KEY" >/tmp/repos-$PROJECT_KEY.json 2>/tmp/repos-$PROJECT_KEY.code) ; tr -d '\r\n' < /tmp/repos-$PROJECT_KEY.code )

if [ "$HTTP_CODE" = "200" ]; then
  REPO_KEYS=$(jq -r '.[].key' /tmp/repos-$PROJECT_KEY.json)
else
  echo "ERROR: Failed to list repos (HTTP $HTTP_CODE)"
fi

# For each repo, get details including xrayIndex (with rate-limit protection)
for REPO_KEY in $REPO_KEYS; do
  HTTP_CODE=$( (jf api "/artifactory/api/repositories/$REPO_KEY" >/tmp/repo-$REPO_KEY.json 2>/tmp/repo-$REPO_KEY.code) ; tr -d '\r\n' < /tmp/repo-$REPO_KEY.code )
  if [ "$HTTP_CODE" = "200" ]; then
    jq '{key, rclass, packageType, xrayIndex}' /tmp/repo-$REPO_KEY.json
  fi
  sleep 1
done

1.3 Members

HTTP_CODE=$( (jf api "/access/api/v1/projects/$PROJECT_KEY/users" >/tmp/users-$PROJECT_KEY.json 2>/tmp/users-$PROJECT_KEY.code) ; tr -d '\r\n' < /tmp/users-$PROJECT_KEY.code )
if [ "$HTTP_CODE" = "200" ]; then
  CURRENT_USERS=$(cat /tmp/users-$PROJECT_KEY.json)
fi

HTTP_CODE=$( (jf api "/access/api/v1/projects/$PROJECT_KEY/groups" >/tmp/groups-$PROJECT_KEY.json 2>/tmp/groups-$PROJECT_KEY.code) ; tr -d '\r\n' < /tmp/groups-$PROJECT_KEY.code )
if [ "$HTTP_CODE" = "200" ]; then
  CURRENT_GROUPS=$(cat /tmp/groups-$PROJECT_KEY.json)
fi

1.4 OIDC (if github.oidc_setup: true)

HTTP_CODE=$( (jf api "/access/api/v1/oidc" >/tmp/oidc-providers.json 2>/tmp/oidc-providers.code) ; tr -d '\r\n' < /tmp/oidc-providers.code )

if [ "$HTTP_CODE" = "200" ]; then
  for PROVIDER_NAME in $(jq -r '.[].name' /tmp/oidc-providers.json); do
    jf api "/access/api/v1/oidc/${PROVIDER_NAME}/identity_mappings" \
      >/tmp/oidc-mappings-$PROVIDER_NAME.json 2>/tmp/oidc-mappings-$PROVIDER_NAME.code
    sleep 1
  done
fi

1.5 Xray Indexing Status

HTTP_CODE=$( (jf api "/xray/api/v1/binMgr" >/tmp/xray-binmgr.json 2>/tmp/xray-binmgr.code) ; tr -d '\r\n' < /tmp/xray-binmgr.code )

if [ "$HTTP_CODE" = "200" ]; then
  BIN_MGR_ID=$(jq -r '.[0].bin_mgr_id // "default"' /tmp/xray-binmgr.json)
else
  BIN_MGR_ID="default"
fi

HTTP_CODE=$( (jf api "/xray/api/v1/binMgr/$BIN_MGR_ID/repos" >/tmp/xray-indexed.json 2>/tmp/xray-indexed.code) ; tr -d '\r\n' < /tmp/xray-indexed.code )

if [ "$HTTP_CODE" = "200" ]; then
  INDEXED_REPOS=$(jq '.indexed_repos' /tmp/xray-indexed.json)
else
  echo "WARN: Could not retrieve Xray indexed repos (HTTP $HTTP_CODE)"
  INDEXED_REPOS="[]"
fi

1.6 Curation Status

# For each remote repo, check curation status (with rate-limit protection)
HTTP_CODE=$( (jf api "/curation/api/v1/repos/${REPO_KEY}" >/tmp/curation-$REPO_KEY.json 2>/tmp/curation-$REPO_KEY.code) ; tr -d '\r\n' < /tmp/curation-$REPO_KEY.code )
if [ "$HTTP_CODE" = "200" ]; then
  CURATED=$(jq -r '.curated // false' /tmp/curation-$REPO_KEY.json)
fi
sleep 1

Phase 2: Compute Diff

Compare the manifest (desired state) against the current state gathered in Phase 1. When a baseline manifest is available (from Phase 0), also compare baseline vs. live to detect drift (changes made outside of the manifest workflow).

Diff modes

Baseline available?	Comparison	What it shows
Yes	Baseline → Desired	What the user intentionally changed in the manifest
Yes	Baseline → Live	What drifted in the platform since last apply
Yes	Desired → Live	What actions are needed (net result)
No	Desired → Live	Standard 2-way diff (current behavior)

The net actions (Desired → Live) always determine what gets applied. The baseline comparisons are informational, helping the user understand why a change is being made.

Categorize every difference into one of these change types:

2.1 Projects

Current State	Desired State	Change Type
Does not exist	In manifest	CREATE project
Exists	In manifest	NO CHANGE (project already exists)
Exists	Not in manifest	FLAG (warn user but do NOT auto-delete)

2.2 Repositories

For each project, build the desired repo set by:

1. Generating expected repos from the manifest ecosystems list (local + remote + virtual per ecosystem)
2. Applying the repositories list (custom definitions): overrides for matching keys, additions for new keys
3. This is the same smart merge logic used by jfrog-create-repos

Then compare the desired repo set against current repos:

Current State	Desired State	Change Type
Repo does not exist	In desired set (ecosystem or custom)	CREATE repo
Repo exists, config matches	In desired set	NO CHANGE
Repo exists, config differs	In desired set with different properties	UPDATE repo config (e.g., description, xrayIndex)
Repo exists	Not in desired set	FLAG (extra repo -- warn but do NOT delete)

For custom repos being created, use inline JSON payloads (same approach as jfrog-create-repos). For overridden repos, merge the custom fields into the existing config.

2.3 Xray/Curation Settings

For each existing repo, compare the current xrayIndex value against the resolved xray_enabled and curation status against curation_enabled:

Setting	Current	Desired	Change Type
xrayIndex	true	true	NO CHANGE
xrayIndex	false	true	ENABLE Xray indexing
xrayIndex	true	false	DISABLE Xray indexing
curated	false	true	ENABLE Curation
curated	true	false	DISABLE Curation

2.4 Members

Compare current project members against manifest members:

Current State	Desired State	Change Type
User/group not in project	In manifest members	ADD member
User/group in project with same role	In manifest with same role	NO CHANGE
User/group in project with different role	In manifest with different role	UPDATE role
User/group in project	Not in manifest members	REMOVE member (flag for user approval)

2.5 OIDC

Current State	Desired State	Change Type
No provider	oidc_setup: true	CREATE provider + mappings
Provider exists, mapping missing	Repo in manifest	CREATE identity mapping
Provider exists, mapping exists	Repo in manifest	NO CHANGE
Mapping exists	Repo not in manifest	FLAG (extra mapping -- warn)
Provider exists	oidc_setup: false	FLAG (warn -- OIDC was previously set up)

Phase 3: Present Diff

Display a clear, structured summary of all changes to the user. Group by project and use symbols to indicate change type.

3-way presentation (when baseline is available)

When a baseline manifest is available, present the diff in two sections: a manifest changes summary (what the user changed) and a drift summary (what changed in the platform), followed by the planned actions (what will be applied).

Reconciliation Plan:
====================

Baseline: system-configuration/2026-02-17T15-30-00Z (Artifactory)

--- Manifest Changes (what you changed) ---

Project "webapp":
  Repositories:
    + ADDED to manifest: go ecosystem (webapp-go-local, webapp-go-remote, webapp-go)
    + ADDED to manifest: webapp-npm-release (custom local/npm)
    ~ CHANGED in manifest: webapp-npm-local (description updated)
  Members:
    + ADDED to manifest: charlie (Developer)
    ~ CHANGED in manifest: alice role (Contributor -> Developer)
    - REMOVED from manifest: bob

Project "newsvc":
  + NEW project added to manifest

--- Drift (changed outside manifest since last apply) ---

Project "webapp":
  Repositories:
    ! webapp-docker-remote: xrayIndex changed (was true, now false) -- modified outside manifest
    ! webapp-legacy-local: exists in JFrog but was never in any manifest
  Members:
    [no drift detected]

--- Planned Actions (what will be applied) ---

Project "webapp" (EXISTS):
  Repositories:
    + CREATE (ecosystem): webapp-go-local, webapp-go-remote, webapp-go (virtual)
    + CREATE (custom): webapp-npm-release (local/npm)
    ~ UPDATE: webapp-npm-local (description changed)
    [no change]: webapp-npm-remote, webapp-npm, webapp-docker-local, webapp-docker-remote, webapp-docker
  Xray:
    ~ ENABLE indexing on: webapp-go-local, webapp-go-remote, webapp-npm-release
  Curation:
    [no change]
  Members:
    + ADD user: charlie (Developer)
    ~ UPDATE role: alice (Contributor -> Developer)
    - REMOVE user: bob (in JFrog but not in manifest)
  OIDC:
    [no change]

Project "newsvc" (NEW):
  + CREATE project
  + CREATE repositories: newsvc-npm-local, newsvc-npm-remote, newsvc-npm
  + ENABLE Xray indexing on: newsvc-npm-local, newsvc-npm-remote
  + ADD members: dev-team (Developer)

Flagged items (require explicit confirmation):
  ! Project "webapp": user "bob" is in JFrog but not in manifest. Remove? (Yes/No)
  ! Project "webapp": repo "webapp-legacy-local" exists but is not in desired repo set. (No action taken -- informational only.)
  ! Project "webapp": repo "webapp-docker-remote" has drifted xrayIndex. The desired state will restore it to true.

Proceed with changes? (Yes / No)

2-way presentation (no baseline)

When no baseline is available, skip the "Manifest Changes" and "Drift" sections and show only the "Planned Actions" section:

Reconciliation Plan:
====================

Baseline: none (comparing desired manifest against live JFrog state)

--- Planned Actions ---

Project "webapp" (EXISTS):
  Repositories:
    + CREATE (ecosystem): webapp-go-local, webapp-go-remote, webapp-go (virtual)
    + CREATE (custom): webapp-npm-release (local/npm)
    ~ UPDATE: webapp-npm-local (description changed)
    [no change]: webapp-npm-remote, webapp-npm, webapp-docker-local, webapp-docker-remote, webapp-docker
  Xray:
    ~ ENABLE indexing on: webapp-go-local, webapp-go-remote, webapp-npm-release
  Curation:
    [no change]
  Members:
    + ADD user: charlie (Developer)
    ~ UPDATE role: alice (Contributor -> Developer)
    - REMOVE user: bob (in JFrog but not in manifest)
  OIDC:
    [no change]

Project "newsvc" (NEW):
  + CREATE project
  + CREATE repositories: newsvc-npm-local, newsvc-npm-remote, newsvc-npm
  + ENABLE Xray indexing on: newsvc-npm-local, newsvc-npm-remote
  + ADD members: dev-team (Developer)

Flagged items (require explicit confirmation):
  ! Project "webapp": user "bob" is in JFrog but not in manifest. Remove? (Yes/No)
  ! Project "webapp": repo "webapp-legacy-local" exists but is not in desired repo set. (No action taken -- informational only.)

Proceed with changes? (Yes / No)

Change type symbols

Symbol	Meaning
+	Create / Add
~	Update / Modify
-	Remove
!	Flagged -- requires explicit user confirmation
[no change]	Already matches desired state

Deletion policy

• Projects: Never auto-delete. Only flag as informational.
• Repositories: Never auto-delete. Flag extra repos as informational.
• Members: Prompt user for each member removal individually. If user declines, skip the removal.
• OIDC mappings: Flag extra mappings as informational. Do not auto-remove.

Phase 4: Apply Delta

Only proceed after the user explicitly approves the changes. Execute only the delta operations, reusing existing skills:

4.1 Create new projects

Skill: jfrog-provision-project -- for each project marked as CREATE.

4.2 Create new / update existing repositories

Skill: jfrog-create-repos -- pass ecosystems, repositories, xray_enabled, and curation_enabled as resolved for the project. The skill handles the smart merge logic and creates/updates repos as needed.

For repos that already exist but need config updates (e.g., changed description, xrayIndex toggle):

jf api "/artifactory/api/repositories/$REPO_KEY" -X POST \
  -H "Content-Type: application/json" \
  -d "$UPDATED_JSON_PAYLOAD"

4.3 Update Xray indexing

For repos where Xray indexing needs to change:

IMPORTANT: The PUT /xray/api/v1/binMgr/{id}/repos endpoint replaces the entire indexed repos list. Sending only new repos will remove all previously indexed repos from the list. Always GET the current list first, merge in new repos (dedup by name), and PUT the combined set.

Enable indexing -- two steps per repo, then a single merged PUT:

Step 1: Set xrayIndex: true on each repo's Artifactory config (add a 1-second delay between calls to avoid rate limiting):

jf api "/artifactory/api/repositories/$REPO_KEY" -X POST \
  -H "Content-Type: application/json" \
  -d '{"xrayIndex": true}'
sleep 1

Step 2: After all repo configs are updated, merge new repos into the Xray index:

# GET existing indexed repos (safe pattern: check status before parsing)
HTTP_CODE=$( (jf api "/xray/api/v1/binMgr/$BIN_MGR_ID/repos" >/tmp/xray-current.json 2>/tmp/xray-current.code) ; tr -d '\r\n' < /tmp/xray-current.code )

if [ "$HTTP_CODE" = "200" ]; then
  EXISTING=$(jq '.indexed_repos // []' /tmp/xray-current.json)
else
  echo "WARN: Could not GET current Xray index (HTTP $HTTP_CODE), using empty list"
  EXISTING="[]"
fi

# Build JSON array of new repos to add (use known values, not extra API lookups)
NEW_REPOS='[{"name":"REPO1","type":"local","pkg_type":"npm"}, ...]'

# Merge: combine existing + new, deduplicate by name
MERGED=$(echo "$EXISTING" "$NEW_REPOS" \
  | jq -s 'add | group_by(.name) | map(.[0])')

# PUT the merged list (write body to file; jf api uses --input for JSON body)
echo "{\"indexed_repos\": $MERGED}" >/tmp/xray-merged.json
jf api "/xray/api/v1/binMgr/$BIN_MGR_ID/repos" -X PUT -H "Content-Type: application/json" \
  --input /tmp/xray-merged.json >/tmp/xray-put-resp.json 2>/tmp/xray-put-resp.code
HTTP_CODE=$(tr -d '\r\n' < /tmp/xray-put-resp.code)

if [ "$HTTP_CODE" = "200" ]; then
  echo "OK: Xray index updated"
else
  echo "ERROR: Xray index PUT failed (HTTP $HTTP_CODE)"
fi

Disable indexing (update repo config):

jf api "/artifactory/api/repositories/$REPO_KEY" -X POST \
  -H "Content-Type: application/json" \
  -d '{"xrayIndex": false}'

4.4 Update Curation

For remote repos where Curation needs to change:

# Enable
jf api "/curation/api/v1/repos/${REPO_KEY}" -X PUT \
  -H "Content-Type: application/json" \
  -d '{"curated": true}'

# Disable
jf api "/curation/api/v1/repos/${REPO_KEY}" -X PUT \
  -H "Content-Type: application/json" \
  -d '{"curated": false}'

4.5 Add/update/remove members

Skill: jfrog-manage-members -- for adding and updating roles.

For removals (only after individual user approval):

# Remove user from project
jf api "/access/api/v1/projects/$PROJECT_KEY/users/$JFROG_USER_NAME" -X DELETE

# Remove group from project
jf api "/access/api/v1/projects/$PROJECT_KEY/groups/$GROUPNAME" -X DELETE

Fallback: same paths with curl -sf -X DELETE and bearer token.

4.6 OIDC changes

Skill: jfrog-oidc-setup -- for creating new providers and mappings.

4.7 GitHub repo configuration

If new ecosystems were added and GitHub repos are configured, the package-manager and CI workflow skills should also be triggered for the new ecosystems:

• Skill: github-configure-package-managers -- for new ecosystems only
• Skill: github-configure-ci-workflows -- for new ecosystems only

Error Handling

• 409 Conflict: Resource already exists -- treat as success (idempotent)
• 404 Not Found: Resource does not exist where expected -- include in diff as needing creation
• If any apply operation fails, report the error but continue with remaining changes
• Provide a final summary of all changes applied, skipped, and failed

Post-Reconciliation

After all changes are applied:

1. The manifest used for reconciliation becomes the new "current state" manifest
2. The orchestration skill persists it via the jfrog-system-config-repo skill, respecting state.destination:
   • artifactory: Upload to the configured project/repo (Operation C)
   • git: Commit and push to the configured git repo (Operation F)
3. Report the upload/push location to the user