Lord1Egypt/ai-skillforge - الصفحة ٥

logging-monitoring

Configuring Python logging library, formatting streams, and managing rotating logs.

لغة النص الأصلي: الإنجليزية

markdown-documentation

Structuring technical markdown docs, wikis, and building clean developer layout grids.

لغة النص الأصلي: الإنجليزية

markdown-mermaid-writing

Comprehensive markdown and Mermaid diagram writing skill. Use when creating any scientific document, report, analysis, or visualization. Establishes text-based diagrams as the default documentation standard with full style guides (markdown + mermaid), 24…

لغة النص الأصلي: الإنجليزية

market-research-reports

Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, deep integration with…

لغة النص الأصلي: الإنجليزية

markitdown

Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.

لغة النص الأصلي: الإنجليزية

matchms

Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and identifying unknown compounds from spectral libraries. Best for metabolite identification, spectral…

لغة النص الأصلي: الإنجليزية

matlab

MATLAB and GNU Octave numerical computing for matrix operations, data analysis, visualization, and scientific computing. Use when writing MATLAB/Octave scripts for linear algebra, signal processing, image processing, differential equations, optimization,…

لغة النص الأصلي: الإنجليزية

matplotlib

Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots…

لغة النص الأصلي: الإنجليزية

medchem

Medicinal chemistry filters. Apply drug-likeness rules (Lipinski, Veber), PAINS filters, structural alerts, complexity metrics, for compound prioritization and library filtering.

لغة النص الأصلي: الإنجليزية

metabolomics-analysis

Untargeted and targeted metabolomics data analysis using pyMZML, mzTab-M processing, and metabolite identification. Use for LC-MS/GC-MS feature detection, metabolite annotation, differential metabolite analysis, pathway mapping, and metabolic flux…

لغة النص الأصلي: الإنجليزية

modal

Cloud computing platform for running Python on GPUs and serverless infrastructure. Use when deploying AI/ML models, running GPU-accelerated workloads, serving web endpoints, scheduling batch jobs, or scaling Python code to the cloud. Use this skill whenever…

لغة النص الأصلي: الإنجليزية

molfeat

Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML.

لغة النص الأصلي: الإنجليزية

mongodb-db

Connecting, querying, updating, and aggregating document-based records in MongoDB.

لغة النص الأصلي: الإنجليزية

multimodal-video

Native video understanding, event timestamping, frame sampling, and video narrative generation.

لغة النص الأصلي: الإنجليزية

networkx

Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, computing graph algorithms (shortest paths, centrality,…

لغة النص الأصلي: الإنجليزية

neurokit2

Comprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle…

لغة النص الأصلي: الإنجليزية

neuropixels-analysis

Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Use when…

لغة النص الأصلي: الإنجليزية

neuroscience-imaging

Neuroimaging data analysis with nilearn, nibabel, and fMRIPrep outputs. Use for fMRI/MRI data loading, brain atlas parcellation, functional connectivity analysis, GLM-based task fMRI, resting-state network analysis, and publication-quality brain…

لغة النص الأصلي: الإنجليزية

nextjs-framework

Building modern React web applications with Server-Side Rendering (SSR), API routes, and routing layouts in Next.js.

لغة النص الأصلي: الإنجليزية

nginx-routing

Configuring Nginx reverse proxy routing, load balancers, rate limits, and SSL termination.

لغة النص الأصلي: الإنجليزية

ngs-pipeline-management

Next-generation sequencing pipeline management with Snakemake and Nextflow. Use for building, running, and debugging reproducible NGS workflows for RNA-seq, WGS, ChIP-seq, ATAC-seq, and amplicon sequencing. Covers pipeline design patterns, HPC/cloud…

لغة النص الأصلي: الإنجليزية

omero-integration

Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.

لغة النص الأصلي: الإنجليزية

omics-integration

Multi-omics data integration using MOFA+, DIABLO, and MixOmics for combining genomics, transcriptomics, proteomics, metabolomics, and epigenomics datasets. Use for identifying shared variation across omics layers, building integrative biomarker models, and…

لغة النص الأصلي: الإنجليزية

open-notebook

Self-hosted, open-source alternative to Google NotebookLM for AI-powered research and document analysis. Use when organizing research materials into notebooks, ingesting diverse content sources (PDFs, videos, audio, web pages, Office documents), generating…

لغة النص الأصلي: الإنجليزية

opentrons-integration

Official Opentrons Protocol API for OT-2 and Flex robots. Use when writing protocols specifically for Opentrons hardware with full access to Protocol API v2 features. Best for production Opentrons protocols, official API compatibility. For multi-vendor…

لغة النص الأصلي: الإنجليزية

optimize-for-gpu

GPU-accelerate Python code using CuPy, Numba CUDA, Warp, cuDF, cuML, cuGraph, KvikIO, cuCIM, cuxfilter, cuVS, cuSpatial, and RAFT. Use whenever the user mentions GPU/CUDA/NVIDIA acceleration, or wants to speed up NumPy, pandas, scikit-learn, scikit-image,…

لغة النص الأصلي: الإنجليزية

pandas-data-wrangling

Cleaning, filtering, merging, and aggregating massive tabular data structures using Pandas.

لغة النص الأصلي: الإنجليزية

paper-lookup

Search 10 academic paper databases via REST APIs for research papers, preprints, and scholarly articles. Covers PubMed, PMC (full text), bioRxiv, medRxiv, arXiv, OpenAlex, Crossref, Semantic Scholar, CORE, Unpaywall. Use when searching for papers, citations,…

لغة النص الأصلي: الإنجليزية

parallel-web

All-in-one web toolkit powered by parallel-cli, with a strong emphasis on academic and scientific sources. Use this skill whenever the user needs to search the web, fetch/extract URL content, enrich data with web-sourced fields, or run deep research reports.…

لغة النص الأصلي: الإنجليزية

pathml

Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide formats. For…

لغة النص الأصلي: الإنجليزية

pdf-parsing-utils

Extracting structured text tables and content blocks from PDF files using PyPDF or pdfplumber.

لغة النص الأصلي: الإنجليزية

peer-review

Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for…

لغة النص الأصلي: الإنجليزية

pennylane

Hardware-agnostic quantum ML framework with automatic differentiation. Use when training quantum circuits via gradients, building hybrid quantum-classical models, or needing device portability across IBM/Google/Rigetti/IonQ. Best for variational algorithms…

لغة النص الأصلي: الإنجليزية

performance-profiling

Measuring CPU performance metrics and memory bottlenecks in Python code blocks.

لغة النص الأصلي: الإنجليزية

playwright-browser

Automated headless web browser testing, page interactions, screenshot capture, and web scraping.

لغة النص الأصلي: الإنجليزية

polars-bio

High-performance genomic interval operations and bioinformatics file I/O on Polars DataFrames. Overlap, nearest, merge, coverage, complement, subtract for BED/VCF/BAM/GFF intervals. Streaming, cloud-native, faster bioframe alternative.

لغة النص الأصلي: الإنجليزية

polars

Fast in-memory DataFrame library for datasets that fit in RAM. Use when pandas is too slow but data still fits in memory. Lazy evaluation, parallel execution, Apache Arrow backend. Best for 1-100GB datasets, ETL pipelines, faster pandas replacement. For…

لغة النص الأصلي: الإنجليزية

pptx-posters

Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX poster format. For standard research posters, use latex-posters instead. This skill provides modern web-based…

لغة النص الأصلي: الإنجليزية

primekg

Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.

لغة النص الأصلي: الإنجليزية

prisma-orm-db

Type-safe database ORM management, migrations, and CRUD operations using Prisma in Node.js or Python.

لغة النص الأصلي: الإنجليزية