Lord1Egypt/ai-skillforge - Page 5

logging-monitoring

Configuring Python logging library, formatting streams, and managing rotating logs.

Langue du texte source : anglais

markdown-documentation

Structuring technical markdown docs, wikis, and building clean developer layout grids.

Langue du texte source : anglais

markdown-mermaid-writing

Comprehensive markdown and Mermaid diagram writing skill. Use when creating any scientific document, report, analysis, or visualization. Establishes text-based diagrams as the default documentation standard with full style guides (markdown + mermaid), 24…

Langue du texte source : anglais

market-research-reports

Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, deep integration with…

Langue du texte source : anglais

markitdown

Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.

Langue du texte source : anglais

matchms

Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and identifying unknown compounds from spectral libraries. Best for metabolite identification, spectral…

Langue du texte source : anglais

matlab

MATLAB and GNU Octave numerical computing for matrix operations, data analysis, visualization, and scientific computing. Use when writing MATLAB/Octave scripts for linear algebra, signal processing, image processing, differential equations, optimization,…

Langue du texte source : anglais

matplotlib

Low-level plotting library for full customization. Use when you need fine-grained control over every plot element, creating novel plot types, or integrating with specific scientific workflows. Export to PNG/PDF/SVG for publication. For quick statistical plots…

Langue du texte source : anglais

medchem

Medicinal chemistry filters. Apply drug-likeness rules (Lipinski, Veber), PAINS filters, structural alerts, complexity metrics, for compound prioritization and library filtering.

Langue du texte source : anglais

metabolomics-analysis

Untargeted and targeted metabolomics data analysis using pyMZML, mzTab-M processing, and metabolite identification. Use for LC-MS/GC-MS feature detection, metabolite annotation, differential metabolite analysis, pathway mapping, and metabolic flux…

Langue du texte source : anglais

modal

Cloud computing platform for running Python on GPUs and serverless infrastructure. Use when deploying AI/ML models, running GPU-accelerated workloads, serving web endpoints, scheduling batch jobs, or scaling Python code to the cloud. Use this skill whenever…

Langue du texte source : anglais

molfeat

Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML.

Langue du texte source : anglais

mongodb-db

Connecting, querying, updating, and aggregating document-based records in MongoDB.

Langue du texte source : anglais

multimodal-video

Native video understanding, event timestamping, frame sampling, and video narrative generation.

Langue du texte source : anglais

networkx

Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, computing graph algorithms (shortest paths, centrality,…

Langue du texte source : anglais

neurokit2

Comprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle…

Langue du texte source : anglais

neuropixels-analysis

Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Use when…

Langue du texte source : anglais

neuroscience-imaging

Neuroimaging data analysis with nilearn, nibabel, and fMRIPrep outputs. Use for fMRI/MRI data loading, brain atlas parcellation, functional connectivity analysis, GLM-based task fMRI, resting-state network analysis, and publication-quality brain…

Langue du texte source : anglais

nextjs-framework

Building modern React web applications with Server-Side Rendering (SSR), API routes, and routing layouts in Next.js.

Langue du texte source : anglais

nginx-routing

Configuring Nginx reverse proxy routing, load balancers, rate limits, and SSL termination.

Langue du texte source : anglais

ngs-pipeline-management

Next-generation sequencing pipeline management with Snakemake and Nextflow. Use for building, running, and debugging reproducible NGS workflows for RNA-seq, WGS, ChIP-seq, ATAC-seq, and amplicon sequencing. Covers pipeline design patterns, HPC/cloud…

Langue du texte source : anglais

omero-integration

Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.

Langue du texte source : anglais

omics-integration

Multi-omics data integration using MOFA+, DIABLO, and MixOmics for combining genomics, transcriptomics, proteomics, metabolomics, and epigenomics datasets. Use for identifying shared variation across omics layers, building integrative biomarker models, and…

Langue du texte source : anglais

open-notebook

Self-hosted, open-source alternative to Google NotebookLM for AI-powered research and document analysis. Use when organizing research materials into notebooks, ingesting diverse content sources (PDFs, videos, audio, web pages, Office documents), generating…

Langue du texte source : anglais

opentrons-integration

Official Opentrons Protocol API for OT-2 and Flex robots. Use when writing protocols specifically for Opentrons hardware with full access to Protocol API v2 features. Best for production Opentrons protocols, official API compatibility. For multi-vendor…

Langue du texte source : anglais

optimize-for-gpu

GPU-accelerate Python code using CuPy, Numba CUDA, Warp, cuDF, cuML, cuGraph, KvikIO, cuCIM, cuxfilter, cuVS, cuSpatial, and RAFT. Use whenever the user mentions GPU/CUDA/NVIDIA acceleration, or wants to speed up NumPy, pandas, scikit-learn, scikit-image,…

Langue du texte source : anglais

pandas-data-wrangling

Cleaning, filtering, merging, and aggregating massive tabular data structures using Pandas.

Langue du texte source : anglais

paper-lookup

Search 10 academic paper databases via REST APIs for research papers, preprints, and scholarly articles. Covers PubMed, PMC (full text), bioRxiv, medRxiv, arXiv, OpenAlex, Crossref, Semantic Scholar, CORE, Unpaywall. Use when searching for papers, citations,…

Langue du texte source : anglais

parallel-web

All-in-one web toolkit powered by parallel-cli, with a strong emphasis on academic and scientific sources. Use this skill whenever the user needs to search the web, fetch/extract URL content, enrich data with web-sourced fields, or run deep research reports.…

Langue du texte source : anglais

pathml

Full-featured computational pathology toolkit. Use for advanced WSI analysis including multiplexed immunofluorescence (CODEX, Vectra), nucleus segmentation, tissue graph construction, and ML model training on pathology data. Supports 160+ slide formats. For…

Langue du texte source : anglais

pdf-parsing-utils

Extracting structured text tables and content blocks from PDF files using PyPDF or pdfplumber.

Langue du texte source : anglais

peer-review

Structured manuscript/grant review with checklist-based evaluation. Use when writing formal peer reviews with specific criteria methodology assessment, statistical validity, reporting standards compliance (CONSORT/STROBE), and constructive feedback. Best for…

Langue du texte source : anglais

pennylane

Hardware-agnostic quantum ML framework with automatic differentiation. Use when training quantum circuits via gradients, building hybrid quantum-classical models, or needing device portability across IBM/Google/Rigetti/IonQ. Best for variational algorithms…

Langue du texte source : anglais

performance-profiling

Measuring CPU performance metrics and memory bottlenecks in Python code blocks.

Langue du texte source : anglais

playwright-browser

Automated headless web browser testing, page interactions, screenshot capture, and web scraping.

Langue du texte source : anglais

polars-bio

High-performance genomic interval operations and bioinformatics file I/O on Polars DataFrames. Overlap, nearest, merge, coverage, complement, subtract for BED/VCF/BAM/GFF intervals. Streaming, cloud-native, faster bioframe alternative.

Langue du texte source : anglais

polars

Fast in-memory DataFrame library for datasets that fit in RAM. Use when pandas is too slow but data still fits in memory. Lazy evaluation, parallel execution, Apache Arrow backend. Best for 1-100GB datasets, ETL pipelines, faster pandas replacement. For…

Langue du texte source : anglais

pptx-posters

Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX poster format. For standard research posters, use latex-posters instead. This skill provides modern web-based…

Langue du texte source : anglais

primekg

Query the Precision Medicine Knowledge Graph (PrimeKG) for multiscale biological data including genes, drugs, diseases, phenotypes, and more.

Langue du texte source : anglais

prisma-orm-db

Type-safe database ORM management, migrations, and CRUD operations using Prisma in Node.js or Python.

Langue du texte source : anglais