WenyuChiou

Use research-hub to operate Zotero, Obsidian, and NotebookLM research workflows through CLI, MCP, REST, and dashboard. Trigger when the user asks to find papers, ingest sources, organize a literature review, build Obsidian research notes, upload sources to…

Turn a list of papers (Zotero collection, Obsidian cluster, manual list) into a compact comparison matrix written to .research/literature_matrix.md, instead of generic per-paper summaries. Use when the user asks to "make a literature matrix", "compare these…

After research-hub ingests a cluster of cited papers, fill the per-paper Key Findings + Methodology + Relevance sections in BOTH Obsidian markdown and the Zotero child note. Use when the user says "fill the TODO Key Findings/Methodology blocks left by…

Operate research-hub workflows for literature discovery, source ingest into Zotero/Obsidian/NotebookLM, dashboard inspection, and vault maintenance. Use when the user asks to find papers and organize them, build a knowledge base, ingest a folder of PDFs,…

Research-domain router that writes `.coord/multi_ai_plan.md` when a single round of work will need two or more delegates AND the work touches research-hub artifacts (`.research/`, `.paper/`, Zotero/Obsidian/NotebookLM pipelines). For a single delegate, use…

Audit and curate a Zotero library — find duplicate DOIs, orphan items missing required tags, propose collection rebinds, identify bloated or under-used collections, generate tag hygiene reports, emit preview-only cleanup plans. Use when the user asks to…

Convert a paper draft + figures + Zotero metadata into reusable .paper/claims.yml and .paper/figures.yml files so the academic-writing-skills skill can do writing, revision, and audit passes without re-reading the manuscript every time. Use when the user asks…

Guide a researcher through 5 Socratic segments — research question sharpening, expected mechanism, identifiability check, validation plan, risk register — and produce `.research/design_brief.md`. Use when the user asks to "frame this research question",…

Verify the contract between WAGF/ABM agents and an external model (flood, hydrology, irrigation, seismic, catastrophe) — units, time steps, state mutation direction, feedback-loop double-counting. Use when the user says "check ABM-model coupling", "audit…

Walk a researcher through designing the LLM-external-model interface for a WAGF domain using the v0.6 coupling layer. Use when the user says "I want to couple my LLM agents to <my simulator>", "help me design the WAGF interface", "scaffold the external model…

Walk a researcher (PhD, collaborator, lab-mate) through building their first WAGF domain — from "I have a research question + maybe an external model" to "I have a working WAGF experiment producing audit traces." Conducts a structured S0-S7 interview, invokes…

First-time WAGF setup walkthrough — environment check, smoke test, first experiment, and handoff to the lifecycle skills. Use when the user says "I just cloned WAGF", "set up WAGF", "first WAGF run", "I'm new to this", "where do I start with WAGF", or opens a…

Use when a WAGF user asks to test a new domain end to end, run the smoke pipeline, decide whether a domain is done, continue after a domain runs, or verify a WAGF setup before experiment design or reproducibility audit.

Turn raw WAGF audit traces (household_governance_audit.csv + raw/*.jsonl) into paper-ready governance metrics — IBR, EHE, rejection taxonomy, retry outcomes, model-condition comparisons. Use when the user says "analyze these traces", "compute governance…

Verify another researcher can reproduce a WAGF experiment — manifests, seeds, configs, runnable commands, data provenance vs git blame, figure-script outputs match references. Use when the user says "audit reproducibility", "prepare for submission", "check…

Turn a WAGF research question into a reproducible experiment matrix (model × governance × seed × metric × artefact path). Use when the user says "design an experiment", "plan an ablation", "compare strict vs disabled", "set up cross-model evaluation", or…

Use when reconciled multi-agent output needs an evidence-based PASS, CONDITIONAL PASS, or FAIL record before a human shipping decision.

Use when an agent task needs bounded context packets, checkpoint-aware compaction, a fresh-session primer, or policy-controlled child results without loading raw logs into the primary session.

Use when a consequential decision has genuinely competing positions that need bounded adversarial review before a human decision.

Use when multiple agent results must be checked for missing evidence, scope drift, contradictions, and merge conflicts before an acceptance decision.

Use when one agent must iteratively plan, act, evaluate evidence, and revise under a readable policy until acceptance, checkpoint, stop, or human escalation.

Use when a user asks to inspect coordination memory, propose a durable decision or resolution, review pending memory proposals, or apply an explicitly approved proposal as a new append-only event.

Use when a goal needs multiple bounded agent roles, parallel or dependent task packets, explicit scope partitions, and a provider-neutral DAG. Not for research-domain routing that owns .research, .paper, Zotero, Obsidian, or NotebookLM workflows; use…

Plan, outline, draft, review, revise, or proofread academic manuscripts, journal articles, theses, conference papers, abstracts, supplementary materials, and submission packages across disciplines and study designs. Use for extended-outline development,…

Conduct reviewer-style, evidence-safe reviews of academic manuscripts across disciplines using progressive method, domain, review-round, and optional reviewer overlays. Use when the user asks for a critique, scientific review, priority comments, top-to-bottom…

Operating harness for working on the method-harness-compiler project (or reviewing its artifacts). Use when starting ANY task on that project — phase reviews, tool discovery, PR review, eval design, memory updates, runtime export, repo maintenance, or A/B…

Use this skill when auditing, simplifying, benchmarking, or refactoring an AI/agent project harness, including CLAUDE.md, AGENTS.md, slash commands, skills, subagents, hooks, tool routing, scheduled reviews, AI-review reports, benchmark scaffolds, and rolling…

Delegate lane for Google Antigravity CLI (agy) - bounded, non-honesty-critical mechanical subtasks via a brief file, an alternative cheap executor alongside codex-delegate and claude-cheap. Promoted to orchestrator-routed 2026-07-11 after the pre-registered…

Delegate lane for Google Antigravity CLI (agy) - bounded, non-honesty-critical mechanical subtasks via a brief file, an alternative cheap executor alongside codex-delegate and claude-cheap. Promoted to orchestrator-routed 2026-07-11 after the pre-registered…

Operating harness for working on the method-harness-compiler project (or reviewing its artifacts). Use when starting ANY task on that project — phase reviews, tool discovery, PR review, eval design, memory updates, runtime export, repo maintenance, or A/B…

Use this skill when auditing, simplifying, benchmarking, or refactoring an AI/agent project harness, including CLAUDE.md, AGENTS.md, slash commands, skills, subagents, hooks, tool routing, scheduled reviews, AI-review reports, benchmark scaffolds, and rolling…

Use when a tool-calling agent does not call a tool, sends wrong arguments, loops without stopping, or needs a function schema. Guides a four-branch diagnosis and five-step schema repair. Do not use for framework-specific, MCP-server, or…

Delegates implementation-heavy or repetitive coding work (batch edits, boilerplate, multi-file refactors with clear patterns, test scaffolding) from Claude to OpenAI Codex CLI. Use when token cost outweighs judgment cost. Trigger phrases include "delegate to…

Full CRUD operations on Zotero library — search, add, update, delete items with notes, tags, and collections (PDF upload is available via raw pyzotero, see references/create-operations.md). Uses dual-API architecture (local API for fast reads, Web API for…

Delegates large-context reading, bilingual or Chinese (CJK / zh-TW) drafting, cross-file synthesis, and second-opinion review to Google Antigravity CLI (`agy`) or legacy Gemini CLI. Use when input exceeds Claude's working budget, when the user writes in…

Sweep up ALL session artifacts left behind by Claude Code: stale git worktrees, dangling git refs, and orphaned worktree directories. Use this skill whenever the user mentions slow performance, low disk space, too many worktrees, cleanup, maintenance, freeing…