bdambrosio/Cognitive_workbench - Page 2

check-health

Collect system and cognitive health metrics. Returns a structured health report with status classifications (ok/warning/critical) for hardware, OS, and cognitive subsystems.

claude-code

Delegate coding, research, and code analysis tasks to Claude Code CLI. PREFERRED tool for reading, searching, or analyzing source code (including your own — use target=self). Use whenever a goal asks you to look at, analyze, or reason about code files (your…

create-tool

Generate a new tool. Python tools go to staging for review. Instruction tools (no code) are created and registered immediately.

extract-references

Extract bibliography/references from PDF files using GROBID and return a Collection of Notes (one per reference).

extract

Derive content from a single Note via LLM-guided extraction, compression, or transformation. Output is grounded entirely in the input — no new information is introduced.

extract-struct

Extract structured metadata (title, authors, year) from paper text using LLM. Use to convert online search results metadata to JSON

format-citation

Format paper citations from semantic-scholar Notes/Collections to BibTeX format

generate-note

Generate new text or code content from scratch using natural language prompt via LLM. Creates content from the LLM's own knowledge — no source documents.

generate-reflective-note

Generate content with awareness of the agent's current reasoning state — goal analysis, situation context, character orientation. Like generate-note but informed by internal planner state.

manage-goals

Create, list, update, and delete scheduled goals. Goals are persistent tasks that can run manually, automatically, or on a daily schedule.

manage-tasks

Create, list, update, and delete tasks. Tasks are work items that go through establishment phases (specification, capability evaluation, execution) with milestone-based progress.

post-bluesky

Post to Bluesky (AT Protocol). Body from target/value. Returns confirmation Note with post URI in metadata.

send-email

Send an email via Gmail SMTP. Body from target/value, headers as parameters. Returns confirmation Note with message-id in metadata.

synthesize

Integrate content across multiple documents to produce new understanding. Use for cross-document synthesis, comparison, and reporting from Collections.

word-count

Count words in text. Use to determine length of a document, e.g. to determine if it needs to be summarized before further use

text-find

Find a substring or pattern in a text document. Returns position with surrounding context. Deterministic — use this instead of asking the LLM to find substrings.

tick

Time heartbeat for chat-mode autonomy — fires every schedule period to trigger concern cadence checks

discover-notes

Global embedding-based search across all Notes; returns a Collection of matches

persist

Mark a Note or Collection as persistent so it survives goal-completion cleanup

create-collection

Create a Collection object and bind to variable

fs-list

List files and directories under scenarios/<world_name>/fs; returns one Note whose body is a text listing (like ls).

obsidian-clipper

Detects new files in the Obsidian vault Clippings folder (from Web Clipper)

fs-find

Find files by filename pattern (glob) under scenarios/<world_name>/fs and return a Collection.

bind

Bind a variable to an existing resource without creating or changing content

create-note

Create a persistent Note object and bind to variable

get-metadata

Retrieve metadata attached to a Note or Collection

set-metadata

Attach or update metadata on a Note or Collection

think

Generate an internal reflection on the state of the plan

browser-visits

Drains buffered page-visit URLs from the browser extension listener

load

Load persistent Note or Collection by ID or name, with optional slice

fs-grep

Search text files under scenarios/<world_name>/fs and return match snippets.

fs-head

Read the first N lines of a text file under scenarios/<world_name>/fs.

fs-read

Read a text, JSON, or PDF file under scenarios/<world_name>/fs and return a Note.

fs-stat

Return metadata for a file or directory under scenarios/<world_name>/fs.

search-web

Search web using Google CSE. Returns Collection of JSON Notes with fields text, metadata.uri (alias: source_url), metadata.domain, format, char_count

init

Initialize filesystem world by building catalog for prompt context

nav-climb

Attempt exactly ONE adjacent climb (+1Y) forward. Atomic navigation operation suitable for composition. nav-climb does not build, it traverses *existing* terrain

filter-structured

Filter Collection by field conditions (SQL WHERE)

map

Apply operation to each item in Collection

pluck

Extract single field value from each Note in Collection