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dataset-code-link-extraction-starter

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UpdatedApril 2, 2026 at 20:49

Extract likely dataset, code, and package links from locally prepared paper text or markdown using deterministic URL and keyword rules.

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ma-compbio-lab

ma-compbio-lab/SkillFoundry

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Biological Scientists, All OtherLife, Physical, and Social Science Occupations·SOC 19-1029

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SKILL.md

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name	dataset-code-link-extraction-starter
description	Extract likely dataset, code, and package links from locally prepared paper text or markdown using deterministic URL and keyword rules.

Dataset / Code / Package Link Extraction Starter

Use this starter on already extracted paper text or markdown.

python3 skills/scientific-knowledge/dataset-code-link-extraction-starter/scripts/run_dataset_code_link_extraction.py \
  --input skills/scientific-knowledge/dataset-code-link-extraction-starter/examples/paper_text.md

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