Menu
Skills in this repository
SkillsMP has collected 1,211 skills from stanfish06/skillquarium. Open a skill to review its source and details.
stanfish06/skillquariumShowing 40 of 1,211 collected skills.
Expert-thinking profile for Semiconductor Physicist (theory / transport & defect spectroscopy / heterostructures): Reasons from ε_n(k), effective-mass tensor, and 2D subband DOS through Hall/multiband fits, mobility scattering analysis, Lang DLTS (E_T, σ,…
Biology research tools reference. Always available inside agent containers.
Search PubMed for scientific literature. Use when the user asks to find papers, search literature, look up research, find publications, or asks about recent studies. Triggers on "pubmed", "papers", "literature", "publications", "research on", "studies about".
Query ClinVar for clinical variant significance. Use when user asks about variant pathogenicity, genetic variants, clinical significance, or disease-causing mutations. Triggers on "clinvar", "pathogenic", "variant significance", "clinical significance",…
Query NCBI GEO for gene expression datasets. Use when user asks about RNA-seq datasets, microarray data, expression data, GEO accessions, or finding public datasets. Triggers on "geo", "gene expression omnibus", "expression dataset", "RNA-seq dataset",…
Analyze DNA/RNA/protein sequences. Use when the user provides a sequence and asks for analysis, translation, GC content, ORFs, motifs, restriction sites, or primer design. Triggers on "sequence", "translate", "GC content", "ORF", "primer", "restriction",…
Migrates .NET test projects from VSTest to Microsoft.Testing.Platform (MTP). Use when user asks to "migrate to MTP", "switch from VSTest", "enable Microsoft.Testing.Platform", "use MTP runner", set OutputType=Exe only for test projects in…
Expert-thinking profile for Endocrinologist (clinical / research): Start with the axis, not the number. Every hormone sits in a loop: hypothalamus → Keep the major axes distinct: HPA: CRH → ACTH → cortisol (and adrenal androgens). HPT: TRH → TSH → T4/T3;…
Expert-thinking profile for Environmental Scientist (fate & transport / exposure-risk assessment / groundwater & remediation / environmental chemistry / regulatory (CERCLA, SW-846)): Reasons from source-pathway-receptor linkages, multimedia partitioning, and…
Comprehensive geospatial science skill covering remote sensing, GIS, spatial analysis, machine learning for earth observation, and 30+ scientific domains. Supports satellite imagery processing (Sentinel, Landsat, MODIS, SAR, hyperspectral), vector and raster…
Multi-modal single-cell analysis with muon/MuData. Joint RNA+ATAC (10x Multiome), CITE-seq (RNA+protein), other multi-omics. MuData holds per-modality AnnData with shared obs. WNN joint embedding, per-modality preprocessing, MOFA factor analysis. Use…
Fast Python I/O for BigWig (continuous genome signal) and BigBed (interval annotation) files via libBigWig. Use for random-access signal queries at specific genomic coordinates (bw.values, bw.stats), computing per-region summary statistics (mean/max/coverage)…
Configure AWS MCP servers for documentation search and API access. Use when setting up AWS MCP, configuring AWS documentation tools, troubleshooting MCP connectivity, or when user mentions aws-mcp, awsdocs, uvx setup, or MCP server configuration. Covers both…
Installs and uses the Render CLI for deploys, logs, SSH, psql, Blueprint validation, and automation. Use when the user needs to run Render CLI commands, script deploys in CI/CD, authenticate with an API key, query services non-interactively, or troubleshoot…
Interact with Obsidian vaults using the Obsidian CLI to read, create, search, and manage notes, tasks, properties, and more. Also supports plugin and theme development with commands to reload plugins, run JavaScript, capture errors, take screenshots, and…
Blood RNA-seq expression-outlier detection for rare-disease diagnostics. Cases scored against a control reference panel; outliers ranked and filtered by a haploinsufficient disease-gene panel.
Primary W&B skill for broad or mixed Weights & Biases work: project overviews, W&B runs and artifacts, Weave traces and evaluations, Reports, and Launch workflows. Use when the task spans multiple W&B surfaces or the user asks generally what is happening in a…
Expert-thinking profile for Accelerator Physicist (experimental / beam physics): Reasons from beam optics, RF cavities, emittance budgets, and loss maps while treating halo and impedance-driven instabilities as first-class failure modes.
Make data visualizations accessible and inclusive. Use when the user needs chart or diagram accessibility guidance, text alternatives for complex visuals, color and contrast review, keyboard support, reduced-motion behavior for animation or parallax, or an…
Expert-thinking profile for Actuarial Scientist (life / health / P&C / valuation / capital & accounting): Reasons from mortality tables (qx, period/cohort, select/ultimate) and Chain-Ladder/Mack reserving through GLM/GAM frequency–severity and Tweedie…
How to use the Adaptyv Bio Foundry API and Python SDK for protein experiment design, submission, and results retrieval. Use this skill whenever the user mentions Adaptyv, Foundry API, protein binding assays, protein screening experiments, BLI/SPR assays,…
Creates unit test YAML definitions that mock upstream model inputs and validate expected outputs. Use when adding unit tests for a dbt model or practicing test-driven development (TDD) in dbt.
Expert-thinking profile for Additive Manufacturing Engineer (LPBF / DED metal AM / qualification): Reasons from melt-pool physics, VED, and thermal history through LPBF vs DED process selection, build orientation anisotropy, support design, powder lot…
Use the Python adjustText package to automatically move matplotlib text labels so they do not overlap each other, points, or other artists. Use for crowded scatter plots, volcano plots, PCA/UMAP labels, line-end annotations, maps, and publication figures that…
Expert-thinking profile for Aerodynamicist (wind tunnel / CFD / flight vehicle external aerodynamics): Reasons from circulation, Cp distributions, and boundary-layer physics through Re/Mach similitude, NACA airfoil polars, stall classification, wind- tunnel…
Expert-thinking profile for Aeronautical Engineer (fixed-wing aircraft design / certification / flight test): Reasons from airfoil polars, drag buckets, and static margin through AVL/DATCOM stability derivatives, wind-tunnel blockage and wall corrections, FAR…
Expert-thinking profile for Aeronomy Scientist (remote sensing / MLT-thermosphere- ionosphere / ISR + resonance lidar / tides & coupling / empirical models (IRI, NRLMSIS)): Reasons from MLT lidar and ISR profiles through IRI/NRLMSIS benchmarks, treating…
Expert-thinking profile for Aerospace Engineer (margin management / aero-structures- propulsion-GNC / V&V (FAR/CS, DO-178C, NASA-STD) / CFD-FEA-flight test): Reasons from margin-managed factors of safety, mass properties, and the analysis-test-similarity V&V…
Unified analysis pipeline for affinity-based proteomics platforms — Olink (PEA, NPX) and SomaLogic SomaScan (SOMAmer, RFU). Platform-aware QC, normalisation, differential abundance, volcano plots, heatmaps, and PCA.
Expert-thinking profile for Agricultural Engineer (field machinery / irrigation & drainage / postharvest storage / precision ag / ASABE standards (D497, ISO 11783)): Reasons from mass, energy, and momentum balances on variable biological media through…
Expert-thinking profile for Agricultural Entomologist (field scouting / IPM / resistance management (IRAC MoA) / biocontrol / pollinator protection): Reasons from pest population dynamics, economic injury levels and thresholds, and degree-day phenology…
Expert-thinking profile for Agroecologist (field ecology / soil health / participatory on-farm trials / landscape GIS / agroecology transitions (FAO 10 Elements)): Reasons from socio-ecological farm systems, functional diversity, soil-biology-mediated…
Expert-thinking profile for Agronomist (field / observational / extension & farm decision support): Reasons from 4R stewardship and G×E×M through MRTN economic N, calibrated soil-test extractants, penetrometer compaction diagnosis, on-farm strip mixed models,…
Expert-thinking profile for AI Researcher (empirical ML / experiment design / evaluation methodology / reproducibility / LLM & RL / trustworthiness (robustness, fairness, safety)): Reasons from data generating processes, inductive biases, and…
Expert-thinking profile for Air Quality Scientist (ambient monitoring / chemical transport modeling (CMAQ, CAMx) / source apportionment / regulatory attainment (NAAQS, SIP)): Reasons from source emissions through transformation, transport, and dose using…
Expert-thinking profile for Algebraist (pure math / structure & morphisms / homological & representation theory / computational algebra (GAP, Sage, Singular) / formal proof (Lean...): Reasons from carriers, operations, and morphisms through isomorphism…
Expert-thinking profile for Algorithms Researcher (algorithm design & analysis / proofs & cost models / approximation & online / empirical algorithmics (DIMACS, MIPLIB)): Expert profile for algorithms researcher — see AGENTS.md for field-specific methods and…
Expert-thinking profile for Analytical Chemist (wet-lab / separation science / spectroscopy / method validation): Reasons from the chemical measurement process through ICH Q2(R2) and USP <621> validation, CRM traceability, EURACHEM uncertainty budgets, and…
Expert-thinking profile for Anatomist (comparative morphology / museum collections / dissection & imaging): Reasons from homology, EPB, and von Baer principles through gross dissection, diceCT/μCT/MRI pipelines, UBERON–PATO EQ annotation, MorphoSource/oVert…
Expert-thinking profile for Animal Geneticist & Breeder (quantitative genetics / BLUP- REML / genomic selection / crossbreeding systems / mate allocation): Reasons from additive genetic variance, response to selection (R = i h sigma_A), accuracy, and…