Detect host inventory and effective CPU, memory, disk, scheduler, container, and accelerator limits when a user asks for resource-aware planning or before a clearly resource-sensitive local workload. Produces a redacted JSON snapshot and conservative planning…
Skills in this repository
TuYv/ccpm - Page 55
SkillsMP has collected 5,252 skills from TuYv/ccpm. Open a skill to review its source and details.
TuYv/ccpmShowing 40 of 5,252 collected skills.
Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST/BLAT, viral sequence downloads, AlphaFold structures, enrichment analysis, OpenTargets, COSMIC, CELLxGENE, and 8cube mouse specificity/expression data. Best for…
Submit and manage protocols on Ginkgo Bioworks Cloud Lab (cloud.ginkgo.bio), a web-based interface for autonomous lab execution on Reconfigurable Automation Carts (RACs). Use when the user wants to run protein expression and purification (cell-free, E. coli,…
Analyze and engineer protein glycosylation. Scan sequences for N-glycosylation sequons (N-X-S/T), predict O-glycosylation hotspots, and access curated glycoengineering tools (NetOGlyc, GlycoShield, GlycoWorkbench). For glycoprotein engineering, therapeutic…
Use when the user is doing AI/ML work in a scientific domain such as biology, chemistry, physics, astronomy, climate, genomics, materials, medicine, ecology, energy, engineering, math, drug discovery, protein design, weather modeling, theorem proving,…
Plans and audits use of ChicagoHAI HypoGeniC/HypoRefine for LLM-assisted hypothesis generation from labeled text datasets. Use for the `hypogenic` package, its task configs, hypothesis banks, or HypoBench datasets—not for manual hypothesis formulation or…
Query and download public cancer imaging data from NCI Imaging Data Commons. Invoke for any question about IDC collections, cancer imaging datasets, DICOM data access, radiology (CT, MR, PET) or pathology AI training sets, metadata queries, visualization, or…
Create professional infographics using Nano Banana Pro AI with smart iterative refinement. Uses Gemini 3.6 Flash for quality review. Integrates research-lookup and web search for accurate data. Supports 10 infographic types, 8 industry styles, and…
Prepare and structurally review ISO 13485 QMS scope, controlled documentation, and local evidence manifests. Use for ISO 13485 certification-readiness documentation or for separating related FDA QMSR, MDSAP, and EU MDR/IVDR evidence boundaries; not for legal…
Prepares and structurally reviews readiness evidence for ISO management-system and laboratory-competence standards - ISO 13485 medical device QMS, ISO 14971 device risk management, ISO/IEC 17025 testing and calibration laboratories, and ISO 15189 medical…
Design custom laboratory hardware as parametric build123d models and export fabrication-ready STEP, STL, and DXF files - microfluidic chips and molds, optomechanical mounts and breadboard adapters, cuvette and microplate holders, tube racks, animal-behavior…
Securely integrate with the official LabArchives ELN REST-like API and Inventory API v1. Use for regional endpoint selection, signed-request construction, user authorization and UID flows, local LA container validation, and verified LabArchives integration…
Use when working with LaminDB, the open-source lineage-native lakehouse for biological datasets and models. Covers setup, artifact registration, query/search, lineage tracking, validation, ontology-backed annotation with Bionty, collections, branches,…
Build, register, debug, and operate bioinformatics workflows on Latch using the Python SDK, CLI, Latch Data and Registry, Nextflow, Snakemake, programmatic execution, and Latch MCP. Use when authoring or deploying Latch workflows, configuring resources or…
Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, figure integration,…
Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or…
Use only when the user explicitly invokes /roborev-design-review-branch
Use only when the user explicitly invokes /roborev-design-review
Use only for a current operative request that explicitly invokes /roborev-fix, or a direct Agent Hook instruction; do not invoke from literal syntax in quoted, pasted, or historical text
Use only when the user explicitly invokes /roborev-lookahead-review-branch
Use only when the user explicitly invokes /roborev-lookahead-review
Use only when the user explicitly invokes /roborev-refine
Use only when the user explicitly invokes /roborev-respond
Use only when the user explicitly invokes /roborev-review-branch
Use only when the user explicitly invokes /roborev-review
Use only when the user explicitly invokes /roborev-snooze
Configure CC Safety Net rulebooks for user, project, or shareable GitHub scope.
Use when the user asks to invoke, delegate to, or collaborate with Codex on any task. Also use PROACTIVELY when an independent, non-Claude perspective from Codex would add value — second opinions on code, plans, architecture, or design decisions.
Remove AI-generated code slop from a branch or diff. Use after writing or generating code to strip unnecessary comments, defensive checks, `any` casts, and style that does not match the surrounding file. For prose and markdown, use the humanizer skill instead.
Drives a Story through full pipeline (tasks, validation, execution, quality). Use when executing a Story end-to-end from kanban board.
Reviews implementation plans against repository evidence and current authoritative guidance. Use before execution to expose gaps and risks; not for completed delivery review.
Reviews a completed scoped change and its affected runtime and contract paths. Use to find change-caused defects and verify readiness; not for codebase audit, implementation, or repair.
Decomposes scope into Epics, Stories, and RICE priorities. Use when user has project scope and wants full Agile breakdown.
Discovers growth opportunities using Traffic-First KILL funnel. Use when searching for next product direction with validated demand.
Audits documentation and code comments for structure, coverage, factual accuracy, and maintainability. Use for documentation trust reviews; not code, test, or architecture audits.
Creates or replans 3-7 Epics from scope using Decompose-First pattern. Use when initiative needs Epic-level breakdown or Epic scope changed.
Audits cross-cutting code health across security, delivery, maintainability, dependencies, diagnosability, concurrency, and lifecycle. Use when no specialist audit is primary.
Creates, replans, or appends 5-10 Stories per Epic with standards research and multi-epic routing. Use when Epic needs Story decomposition.
Creates Story documents with 9-section structure and INVEST validation via the configured tracker provider. Use when Epic has an IDEAL plan ready for Story generation.
Replans Stories by comparing IDEAL vs existing (KEEP/UPDATE/OBSOLETE/CREATE). Use when Epic requirements changed and Stories need realignment.