u9401066/med-paper-assistant

parallel-search

Run multiple complementary literature searches and merge results for broad coverage. Triggers include parallel search, 並行搜尋, 廣泛搜尋.

Source text: Chinese

academic-writing-harness

Cross-agent workflow for evidence-grounded manuscripts, proposals, reports, student papers, and preprints with auditable gates.

academic-writing-harness

Cross-agent workflow for evidence-grounded manuscripts, proposals, reports, student papers, and preprints with auditable gates.

pdf-asset-extractor

MCP tools for PDF ingestion → extract figures, tables, sections → build knowledge graph. Transforms PDF into queryable assets (images, tables, text) with cross-document RAG. Triggers: PDF, ingest, extract, 圖片, 表格, figure, table, manifest, knowledge graph,…

Source text: Chinese

pipeline-persistence

Pipeline persistence — save, load, and reuse structured search plans. Triggers: pipeline, 管道, search plan, 搜尋計畫, 重複搜尋, saved search, 排程, schedule, workflow, DAG

Source text: Chinese

pubmed-export-citations

Export citations with prepare_export. Triggers: 匯出, export, RIS, BibTeX, EndNote, Zotero, Mendeley, 引用格式, reference manager

Source text: Chinese

pubmed-fulltext-access

Full text access using get_fulltext, figure extraction, and institutional link tools. Triggers: 全文, fulltext, PDF, open access, 免費下載, PMC, 開放取用

Source text: Chinese

pubmed-gene-drug-research

Gene, compound, and variant research using search_gene, search_compound, and search_clinvar. Triggers: 基因, gene, 藥物, drug, compound, PubChem, ClinVar, 變異, variant, 臨床意義

Source text: Chinese

pubmed-mcp-tools-reference

Version-aware reference for the installed PubMed Search MCP tool surface. Triggers: 工具列表, all tools, 完整功能, tool reference, 有哪些工具

Source text: Chinese

pubmed-multi-source-search

Cross-database search using unified_search across academic sources. Triggers: 跨資料庫, multi-source, Semantic Scholar, OpenAlex, CORE, Europe PMC, 綜合搜尋

Source text: Chinese

pubmed-paper-exploration

Deep exploration from a key paper using related, citing, reference, and citation tree tools. Triggers: 這篇論文的相關研究, 誰引用這篇, 類似文章, related articles, citation tree, paper exploration

Source text: Chinese

pubmed-pico-search

Agent-guided PICO clinical question search using parse_pico handoff and unified_search. Triggers: PICO, 臨床問題, A比B好嗎, treatment comparison, clinical question, 療效比較

pubmed-quick-search

Quick literature search using unified_search. Triggers: 搜尋, 找論文, search papers, find articles, PubMed, 文獻搜尋, 快速搜尋

Source text: Chinese

pubmed-systematic-search

Comprehensive search using generate_search_queries and unified_search. Triggers: 系統性搜尋, 完整搜尋, 文獻回顧, systematic search, comprehensive, MeSH expansion, 同義詞

Source text: Chinese

code-refactor

Proactively detect and execute code refactoring to maintain DDD architecture and code quality. Triggers: RF, refactor, 重構, cleanup, optimize.

Source text: Chinese

memory-checkpoint

Externalize detailed Memory Bank state before compaction or pauses. Triggers: CP, checkpoint, 存檔, sync memory, pause, 要離開.

Source text: Chinese

reference-management

Save, inspect, format, and verify scholarly references while preserving PubMed-first metadata trust boundaries.

Source text: Chinese

submission-preparation

Prepare journal submission artifacts, cover letters, highlights, reviewer responses, and compliance checklists.

Source text: Chinese

auto-paper

全自動論文撰寫 + 閉環自我改進系統。 LOAD THIS SKILL WHEN: 全自動寫論文、auto write、自動撰寫、幫我寫完整篇、autopilot、從頭到尾、一鍵寫論文 CAPABILITIES: 編排所有研究 Skills + 3 層 Audit Hooks + Meta-Learning 自我改進

Source text: Mixed languages

draft-writing

論文草稿的撰寫、讀取、引用管理。 LOAD THIS SKILL WHEN: 寫草稿、draft、撰寫、Introduction、Methods、Results、Discussion、引用、citation、字數、patch、編輯草稿 CAPABILITIES: draft_action(action="write"|"section"|"read"|"list"|"insert_citation"|"sync_references"|"count_words"|"available_citations"|"pat…

Source text: Chinese

word-export

Word 匯出技能 - 將草稿匯出為符合期刊格式的 Word 文件。 LOAD THIS SKILL WHEN: 匯出 Word、export、template、word count、轉成 docx

Source text: Chinese

literature-review

系統性文獻搜尋、篩選、下載、整理。觸發：文獻回顧、找論文、搜尋文獻、systematic review、literature search、PubMed、找文章、搜paper、review、reference、citation、引用、參考文獻、背景調查、background。

Source text: Chinese

concept-development

發展研究概念並驗證創新性。觸發：concept、發展概念、研究概念、novelty、創新點、補充概念、幫我補充、擴展概念、加強、驗證失敗、novelty不夠、怎麼改。

Source text: Chinese

git-precommit

提交前編排器 + Paper-Aware Pre-Commit Hooks。 LOAD THIS SKILL WHEN: commit、提交、推送、做完了、收工 CAPABILITIES: 記憶同步、文檔更新、Paper 品質把關、Git 操作

Source text: Chinese

project-management

研究專案的建立、切換、設定管理。 LOAD THIS SKILL WHEN: 新專案、切換專案、專案設定、paper type、start exploration、convert exploration CAPABILITIES: project_action, workspace_state_action

Source text: Chinese

memory-checkpoint

Externalize detailed memory to Memory Bank before conversation summarization to prevent context loss. Triggers: CP, checkpoint, save, 存檔, 記一下, 保存, sync memory, dump, 先記著, 等一下, 要離開, 暫停, pause, 儲存進度, 怕忘記.

Source text: Chinese

academic-debate

學術辯論與觀點比較框架。 LOAD THIS SKILL WHEN: debate、辯論、pro/con、正反方、devil's advocate、挑戰假設、counter-argument、反駁、compare viewpoints、比較觀點、challenge、質疑 CAPABILITIES: 純指令技能，不需要專屬 MCP tool。利用 LLM 推理能力 + 現有 tools (read_draft, search_local_references) 完成分析。

Source text: Chinese

changelog-updater

更新 CHANGELOG.md。觸發：changelog、變更、版本、發布、改了什麼。

Source text: Chinese

code-reviewer

程式碼審查。觸發：review、審查、檢查、看一下、有沒有問題、安全。

Source text: Chinese

concept-validation

概念驗證：確保 concept.md 達到可寫作標準。 LOAD THIS SKILL WHEN: 驗證、validate、可以開始寫了嗎、novelty 夠嗎、check concept CAPABILITIES: validate_concept, validate_concept_quick, validate_for_section

Source text: Chinese

ddd-architect

DDD 架構輔助與檢查。觸發：架構、新功能、新模組、domain、structure。

Source text: Chinese

git-doc-updater

Git 提交前文檔同步。觸發：docs、文檔、sync docs、發布。

Source text: Chinese

idea-validation

研究假說驗證與可行性評估框架。 LOAD THIS SKILL WHEN: hypothesis、假說、PICO、feasibility、可行性、testable、可驗證、研究計畫評估、check feasibility CAPABILITIES: 純指令技能，不需要專屬 MCP tool。利用 LLM 推理能力 + 現有 tools (list_saved_references, search_local_references) 完成分析。

Source text: Chinese

manuscript-review

模擬同行審稿與報告指引合規性檢查框架。 LOAD THIS SKILL WHEN: peer review、同行審查、reviewer、審稿、reporting guidelines、CONSORT、STROBE、PRISMA、CARE、critique、檢查稿件、稿件問題 CAPABILITIES: 純指令技能，搭配 read_draft MCP tool 讀取草稿內容。LLM 用醫學知識做審查，比 regex 更準確。

Source text: Chinese

memory-updater

更新 Memory Bank 檔案。觸發：memory、記憶、進度、存檔、sync、做到哪。

Source text: Chinese

project-init

初始化新專案。觸發：init、新專案、初始化、create project。

Source text: Undetermined

readme-i18n

README 多語言同步。觸發：i18n、翻譯、多語言、sync readme。

Source text: Chinese

readme-updater

更新 README.md。觸發：readme、說明、文檔、怎麼用、安裝說明。

Source text: Chinese

roadmap-updater

更新 ROADMAP.md 狀態。觸發：roadmap、路線、規劃、里程碑。

Source text: Chinese

test-generator

生成測試套件。觸發：test、測試、寫測試、coverage、覆蓋率、pytest、unittest、驗證、TG、unit test、整合測試、e2e、static、ruff、mypy、lint。

Source text: Chinese