Run any Skill in Manus with one click

inter-rater-kappa

Stars3

Forks0

UpdatedJune 15, 2026 at 02:36

Compute Cohen's kappa per criterion across two or more reviewers from the audit log of locked records. Use to measure agreement on chart-review-guideline application.

Installation

Install with Codex or Claude Copy this prompt, paste it into Codex, Claude, or another assistant, and let it review the skill page and install it for you.

Run Skill in Manus

Source

yuhangjiang22

yuhangjiang22/chart-review-platform

View GitHub Repository View Creator Repositories

Download

Run Skill in Manus

Related occupationsSOC

Based on SOC occupation classification

Software DevelopersComputer and Mathematical Occupations·SOC 15-1252

SKILL.md

readonly

name	inter-rater-kappa
description	Compute Cohen's kappa per criterion across two or more reviewers from the audit log of locked records. Use to measure agreement on chart-review-guideline application.

Inter-rater Kappa

Computes per-criterion kappa from per-reviewer answers reconstructed from audit JSONLs.

How it works (today)

Implemented as app/server/kappa.ts. Used by the methodologist's QA panel.

Future externalization

Out of scope for batch E.0.

More from this repository

same repository

chart-review-acts

yuhangjiang22/chart-review-platform

ACTS Alzheimer's/dementia phenotyping — extract from a patient's clinical notes: impaired cognition (impaired_cognition), the documented APOE genotype (apoe_genotype → ε2/ε3/ε4 allele flags computed), postmenopausal status + last menstrual period, documented cognitive / depression / neuropsychiatric scale scores (MoCA, MMSE, CDR, Hachinski, Mattis DRS, TICS, GDS, Cornell, NPI, Global Deterioration stage), education years, and smoking status. Evidence-cited. Triggers on: impaired cognition, MCI, dementia, APOE, ε2/ε3/ε4, postmenopause, LMP, MoCA, MMSE, CDR, Hachinski, NPI, GDS, smoking, ACTS.

2026-07-213

chart-review-bso-ad-ner

yuhangjiang22/chart-review-platform

BSO-AD (Biological / Social / Other determinants of Alzheimer's Disease) NER scope skill. Activates when extracting entities under the BSO-AD ontology — 9 entity-type subtrees covering Demographic, Behavior / Lifestyle, Economic Stability, Education / Literacy, Food, Health Care, Neighborhood, Social and Community Context, and Dementia. Use this skill in combination with the universal chart-review-ner skill when the task_id is "bso-ad-ner" (or any task with task_kind=ner that pins the BSO-AD ontology).

2026-07-203

chart-review-psma-context

yuhangjiang22/chart-review-platform

PSMA PET/CT clinical-context chart review. Activate when assembling the prostate-cancer context a radiologist needs to interpret a PSMA PET/CT — Grade Group, PSA + trend, prior metastatic sites, treatment history (prostatectomy, radiation, ADT, ARPI, chemo, radioligand), the scan indication, and prior-imaging status — answering the PC0–PC3 chart-review questions per patient from pathology, oncology, urology, radiation-oncology, and prior imaging notes plus structured EHR data.

2026-07-203

chart-review-asthma-adherence

yuhangjiang22/chart-review-platform

Asthma adherence task. Activates when extracting structured guideline-concordance signals from an asthma patient's chart — tier 0 (eligibility), tier 1 (control assessment: ACT score, exacerbation history, controller use), tier 2 (management: step therapy, spirometry follow-up, written action plan). Use this skill when task_kind=adherence and the task_id is asthma-adherence. The pipeline-extract-adherence package reads the references/questions/*.yaml + references/rules/*.yaml in this bundle to build the tier prompts and concordance verdicts.

2026-07-163

chart-review-cp-depression

yuhangjiang22/chart-review-platform

Identify evidence of depression from a patient's post-index clinical notes: explicit diagnosis, depressive symptoms, antidepressant use, psychiatry referral, and PHQ-9 severity. Tier and final Depression/No Depression decision are computed. Evidence-cited. Triggers on: depression, PHQ-9, depressive disorder, MDD, antidepressant.

2026-07-133

chart-review-rucam

yuhangjiang22/chart-review-platform

Score RUCAM (Roussel Uclaf Causality Assessment Method) for drug-induced liver injury (DILI) from EHR structured data + clinical notes. Triggers on: RUCAM, DILI causality, drug-induced liver injury, hepatotoxicity, R ratio, time to onset, rechallenge, liver injury scoring.

2026-07-133