scverse

Profile the memory usage of a Python script using memray and visualize a temporal flamegraph in the browser. Use when the user wants to investigate memory consumption, find leaks, or understand allocation patterns.

Profile Python import time using profimp and open a waterfall HTML report. Use when investigating slow startup or wanting to identify which imports are most expensive.

Profile the execution time of a Python script using py-spy and visualize the result with speedscope. Use when the user wants to benchmark performance, find slow code paths, or profile CPU time.

Use for any task involving the decoupler library — inferring biological activity/enrichment scores from omics data (bulk, single-cell, spatial). Triggers on estimating transcription factor (TF) activity, pathway activity, or gene-set enrichment from an…

Use for any question or task involving the Python package `acumen` (its CLI or its API) — setting up a benchmark project against a target package, writing or generating benchmark tasks, drafting/improving/hand-editing an agent Skill, running and interpreting…