medical-research-skills

Generates CIOMS I-compliant ICSR narratives from adverse event case data for FDA and EMA regulatory submission. Includes temporal analysis, MedDRA coding, causality assessment using WHO-UMC or Naranjo criteria, and multi-format output.

Use when determining author order on research manuscripts, assigning CRediT contributor roles for transparency, documenting individual contributions to collaborative projects, or resolving authorship disputes in multi-institutional research. Generates fair and transparent auth...

Generate structured SOAP notes from clinical narratives, transcripts, or existing notes; use when the user needs de-identified clinical documentation organized into Subjective, Objective, Assessment, and Plan sections, with clear assumptions and review points.

Use blind-review-sanitizer for academic writing workflows that need structured anonymization, explicit assumptions, and clear output boundaries for double-blind submission.

Use when formatting references for journal submission, converting between citation styles (APA, MLA, Vancouver, Chicago), generating bibliographies for manuscripts, or ensuring consistent reference formatting. Automatically formats citations and bibliographies in 1000+ academi...

Generate professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings, including patient cohort analyses (biomarker-stratified with outcomes) and treatment recommendation reports (evidence-based guidelines with decision algorithms). ...

Adapt scientific abstracts to conference-specific word limits, section rules, and formatting constraints; use when reshaping an existing abstract for submission.

Generates a journal-ready cover letter from manuscript metadata, highlights, and journal-fit notes. Use when preparing an academic submission package and you need editor-facing language that clearly states novelty, relevance, declarations, and corresponding-author details.

Generate hospital discharge summaries from admission data, hospital course, diagnoses, procedures, and follow-up plans; use when a structured discharge document is required from clinical notes.

Structures and writes discussion sections for academic papers and research reports. Use when writing a discussion section, interpreting research results, connecting findings to existing literature, addressing study limitations, synthesizing conclusions, or drafting any part of...

Generate standardized figure legends for scientific figures and charts; use when preparing publication-ready legends that summarize design, variables, sample size, and key statistical notes.

Use figure reference checker for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Automatically find references for academic paper Markdown files. Reads full paper text, identifies each knowledge point requiring citation (epidemiological data, mechanism descriptions, existing research conclusions, etc.), searches PubMed for 3-5 most relevant articles per kn...

EndNote reference formatting workflow — converts [PMID: xxxx] markers in Markdown manuscripts to Word (.docx) using EndNote CWYW-recognized {Author, Year, Title} placeholders, while generating .ris files for automatic import into the local EndNote library. Users click "Update ...

Zotero reference formatting workflow. Converts [PMID: xxxx] markers in Markdown manuscripts to Word (.docx) with native Zotero field codes (ADDIN ZOTERO_ITEM / ADDIN ZOTERO_BIBL). Users click "Refresh" once in Word to complete formatting. Includes search_styles.py for searchin...

Use grant budget justification for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Simulate structured grant peer review for biomedical proposals; use when stress-testing significance, innovation, approach, feasibility, and reviewer-facing weaknesses before submission.

Assist with biomedical grant proposal drafting, structure, and revision; use when preparing fundable proposal sections, aligning aims and methods, or improving reviewer-facing clarity.

Clinical-grade PII/PHI detection and de-identification for healthcare text data. Scans all 18 HIPAA identifier categories with confidence scoring, generates audit logs, supports custom regex patterns, and produces de-identified output while preserving document structure.

Assists researchers with Institutional Review Board (IRB) application tasks, including drafting informed consent documents, reviewing research protocols for compliance, generating application forms, and preparing submission checklists. Use when the user mentions IRB, Instituti...

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles.

Write comprehensive literature reviews for medical imaging AI research. Use when writing survey papers, systematic reviews, or literature analyses on topics like segmentation, detection, classification in CT, MRI, X-ray, ultrasound, or pathology imaging. Triggers on requests f...

A multi-stage workflow for writing long-form medical reviews; used when the user needs to build an outline based on PubMed literature, write chapter by chapter, perform supplementary searches, and format citations; input is the review topic and project directory, output is a c...

Generates the Methods section for a meta-analysis paper, including search strategy, screening, quality assessment, data extraction, and statistical analysis.

Generates a meta-analysis baseline characteristics section (text + table) from raw data. Supports Chinese and English. Use when the user provides baseline data and wants a formatted results section.

Generates a first draft of a clinical meta-analysis paper. Input the research report (including Methods and Results sections), language, and title to automatically generate a complete paper draft including Abstract, Introduction, Discussion, and other sections, with automatic ...

Analyzes forest plots for meta-analysis, generating detailed descriptions and formatting figure legends in Chinese or English. Use when the user wants to interpret a forest plot image, describe its statistical significance (heterogeneity, p-value), and format the output with s...

Generates a Meta-analysis results section description for funnel plots, including statistical tables (Egger's, Begg's, Trim & Fill) and figure legends. Supports English and Chinese outputs. Use when user provides a funnel plot image and statistics and wants a formatted report.

Generates the "Risk of Bias" results section for a meta-analysis based on assessment tables and statistics. Use when the user wants to draft the risk of bias analysis text from provided data tables.

Generates the "Results" section for meta-analysis sensitivity analysis based on statistical tables and titles. Use when the user wants to describe sensitivity analysis results or format sensitivity tables for a meta-analysis paper.

Write and revise the Methods section of research papers to ensure reproducibility; use when preparing an IMRAD manuscript or responding to journal/reporting-guideline requirements (e.g., CONSORT/STROBE/PRISMA).

Generates academic reviews for molecules in diseases using PubMed research. Invoke when user needs biomedical literature review with Vancouver citation format.

Generate a complete NSFC (National Natural Science Foundation of China) General Program grant application in Chinese, following the 2026 official template. Use when the user provides a scientific hypothesis and wants to generate a full grant application document, including abs...

Use rebuttal letter strategist for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.

Generate medical referral letters with patient summary, reason for referral, key findings, and requested next steps; use when transferring care or communicating with another clinician or department.

Prepare FDA/EMA regulatory submissions (IND/NDA/BLA/510(k)/PMA/MAA) in CTD format. Generate module outlines (Modules 1-5), run ICH compliance checks (ALCOA+, E6 GCP, Q1-Q12), verify data integrity, and produce submission-ready dossiers with cover letters and checklists.

Helps organize reviewer comments and generate a standardized Word (.docx) response letter that maps each change to its exact location (page/paragraph/line). Use when revising a manuscript, replying to peer-review feedback, or preparing internal review responses.

Polish reviewer-response letters by softening defensive language, preserving factual meaning, and keeping responses professional, concise, and publication-appropriate.

Advanced sample size and power calculations for complex study designs including survival analysis, clustered designs, and multiple comparisons.

Use study limitations drafter for academic writing workflows that need structured execution, explicit assumptions, and clear output boundaries.