mdbabumiamssm/LLMs-Universal-Life-Science-and-Clinical-Skills- - Page 7

spatial-trajectory

Trajectory inference and pseudotime analysis using DPT, Monocle3, Slingshot, scVelo for RNA velocity, and PAGA for abstracted graph analysis.

Langue du texte source : anglais

sc-velocity

RNA velocity analysis for single-cell omics. Wraps scVelo to quantify spliced/unspliced kinetics, latent time, velocity graphs, and driver gene ranking with optional dynamical mode fitting.

Langue du texte source : anglais

cjk-viz

CJK (中日韩) 字体检测与 matplotlib 配置。任何涉及中文标签、标题、图例的 可视化任务启动前必须先执行本 skill 的字体检测流程，确保不会出现方块乱码。 适用于 matplotlib / seaborn / plotly 静态导出等场景。

Langue du texte source : chinois

charls-reproduce

CHARLS (China Health and Retirement Longitudinal Study) database-specific knowledge for reproducing published papers. Use when reproducing or analyzing papers that use CHARLS data, including variable mapping from harmonized to raw questionnaire items,…

Langue du texte source : Plusieurs langues

paper-reproduce

Systematic methodology for reproducing published academic papers using provided data. Use when the user asks to reproduce, replicate, or verify results from a published paper, including sample selection, descriptive statistics, regression analyses, and…

Langue du texte source : Plusieurs langues

biomed-dispatch

Dispatch biomedical research and data analysis tasks to Claude Code with K-Dense Scientific Skills. Use this skill when the user asks to run any bioinformatics, genomics, drug discovery, clinical data analysis, proteomics, multi-omics, medical imaging, or…

Langue du texte source : Plusieurs langues

feishu-rich-card

Send rich interactive cards with embedded images in Feishu group chats. Use when reporting progress, sharing analysis results, or presenting any content that benefits from mixed text+image layout in Feishu. Combines SVG UI templates (or matplotlib/PIL charts)…

Langue du texte source : chinois

svg-ui-templates

Generate professional SVG UI panels for structured information display. Use when presenting lists, task checklists, pipeline/dependency status diagrams, or rich-text report layouts as SVG images. Covers four templates - list-panel, checklist-panel,…

Langue du texte source : anglais

bioinformatics-singlecell

Single-cell and multi-omic analysis for hematology, oncology, and translational biology. Use when working with scRNA-seq, CITE-seq, scATAC-seq, multiome, trajectory analysis, batch correction, cell typing, differential expression, or publication-ready figures…

Langue du texte source : anglais

biomedical-rag-citation-pipelines

Design citation-grounded biomedical retrieval and generation systems for literature-heavy assistants. Use when building or improving PubMed or PMC search pipelines, hybrid retrieval, claim-to-citation validation, evidence-aware answer synthesis, or evaluation…

Langue du texte source : anglais

computational-software-development

Full-stack computational software development for biomedical and life science applications. Use when building or refactoring research software, LLM-enabled analysis platforms, scientific web apps, data pipelines, RAG systems, evaluation harnesses, or…

Langue du texte source : anglais

mpn-research-assistant

Myeloproliferative neoplasm research support across JAK2, CALR, MPL, PPM1D, megakaryocyte biology, fibrosis, clonal evolution, and translational oncology. Use when synthesizing MPN literature, structuring hypotheses, interpreting MPN datasets, summarizing…

Langue du texte source : anglais

ngs-analysis

Practical next-generation sequencing analysis support for bulk RNA-seq, variant calling, alignment, preprocessing, and workflow assembly. Use when working from FASTQ or BAM/VCF inputs, setting up QC, choosing aligners or quantifiers, organizing reproducible…

Langue du texte source : anglais

skill-library-maintainer

Maintain and improve large skill repositories with consistent metadata, lean SKILL.md bodies, reusable references, and validation discipline. Use when auditing skill collections, normalizing frontmatter, splitting oversized skills into references, adding new…

Langue du texte source : anglais

ai-safety-auditor

Validates clinical AI outputs for safety, bias, and hallucination risks before delivery to end-users or clinicians.

Langue du texte source : anglais

safety-monitor

Safety Monitor

Langue du texte source : anglais

wearable-analysis-agent

Analyzes longitudinal wearable sensor data (heart rate, activity, sleep) to detect anomalies and provide personalized health insights.

Langue du texte source : anglais

liquid-biopsy-analytics-agent

Comprehensive analysis of liquid biopsy data (ctDNA, CTCs) for cancer detection, MRD monitoring, and response tracking.

Langue du texte source : anglais

tumor-mutational-burden-agent

Calculates and harmonizes Tumor Mutational Burden (TMB) across platforms to predict immunotherapy response.

Langue du texte source : anglais

pharmacogenomics-agent

AI-driven pharmacogenomic analysis for precision dosing and adverse event prediction using multi-omics data.

Langue du texte source : anglais

swarm-orchestrator

Run Agent Swarms

Langue du texte source : anglais

memory-management

Two-tier memory system that makes Claude a true workplace collaborator. Decodes shorthand, acronyms, nicknames, and internal language so Claude understands requests like a colleague would. CLAUDE.md for working memory, memory/ directory for the full knowledge…

Langue du texte source : anglais

task-management

Simple task management using a shared TASKS.md file. Reference this when the user asks about their tasks, wants to add/complete tasks, or needs help tracking commitments.

Langue du texte source : anglais

knowledge-synthesis

Combines search results from multiple sources into coherent, deduplicated answers with source attribution. Handles confidence scoring based on freshness and authority, and summarizes large result sets effectively.

Langue du texte source : anglais

search-strategy

Query decomposition and multi-source search orchestration. Breaks natural language questions into targeted searches per source, translates queries into source-specific syntax, ranks results by relevance, and handles ambiguity and fallback strategies.

Langue du texte source : anglais

source-management

Manages connected MCP sources for enterprise search. Detects available sources, guides users to connect new ones, handles source priority ordering, and manages rate limiting awareness.

Langue du texte source : anglais

radgpt-radiology-reporter

Radiology Reporter

Langue du texte source : anglais

crispr-guide-design

Guide foundry

Langue du texte source : anglais

trialgpt-matching

Trial shortlist

Langue du texte source : anglais

mage-antibody-generator

Ab seq forge

Langue du texte source : anglais

antibody-design-agent

An advanced agent for de novo antibody design and optimization using state-of-the-art protein language models (MAGE, RFdiffusion).

Langue du texte source : anglais

variant-interpretation-acmg

Classifies genetic variants according to ACMG (American College of Medical Genetics) guidelines.

Langue du texte source : anglais

varcadd-pathogenicity

Variant Scorer

Langue du texte source : anglais

biomedical-data-analysis

Omics data forge

Langue du texte source : anglais

kragen-knowledge-graph

Graph-RAG Solver

Langue du texte source : anglais

leads-literature-mining

Review Automator

Langue du texte source : anglais

biomni-research-agent

Bio-Research Generalist

Langue du texte source : anglais

biomaster-workflows

Pipeline maestro

Langue du texte source : anglais

cellagent-annotation

Cell tagger

Langue du texte source : anglais

compbioagent-explorer

scRNA-seq Explorer

Langue du texte source : anglais