소스 정보
- 저장소
- ffsshhttiikk/opencode-agents-skills
- 최근 소스 활동
- 2026년 2월 28일 22:55
- 감지된 SKILL.md 언어
- 영어
- 스타
- 3
- 포크
- 2
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SKILL.md 표시 중
SKILL.md
소스 지침 · 읽기 전용 미리보기- name
- structural
- description
- Structural biology fundamentals
- license
- MIT
- compatibility
- opencode
- metadata
- {"audience":"biologists, students, researchers","category":"biology"}
## What I do
- Explain molecular structure principles
- Describe protein structure organization
- Discuss structural analysis methods
- Analyze molecular interactions
- Connect structure to function
- Explain structural determination techniques
## When to use me
- When learning structural biology basics
- When explaining protein structure
- When studying molecular interactions
- When preparing educational content
## Key Concepts
### Biomolecular Structure
**Proteins**
- Amino acids linked by peptide bonds
- 20 standard amino acids
- Primary through quaternary structure
- Folding into 3D conformation
**Nucleic Acids**
- DNA: Double helix (B-form)
- RNA: Various structures (A, Z, hairpins)
- Nucleotides: Phosphate-sugar-base
### Molecular Interactions
```python
# Common interactions
interactions = {
'covalent': 'Strong, ~350 kJ/mol, shared electrons',
'ionic': 'Moderate, ~250 kJ/mol, charge-charge',
'hydrogen': 'Weak-moderate, ~20-40 kJ/mol, X-H---Y',
'hydrophobic': 'Weak, ~5 kJ/mol, entropy-driven',
'van_der_waals': 'Very weak, ~1 kJ/mol, induced dipoles'
}
# Bond types in biomolecules
bonds = {
'peptide': 'N-C, backbone',
'glycosidic': 'Sugar-sugar, sugar-base',
'phosphodiester': 'Nucleotide backbone'
}
```
### Techniques Overview
- X-ray crystallography
- NMR spectroscopy
- Cryo-EM
- Mass spectrometry
- Spectroscopy (UV, CD, fluorescence)
- Computational modeling
### Structure Databases
- PDB: Protein Data Bank
- NCBI Structure
- EMDB: Electron Microscopy DB
- AlphaFold DB
GitHub에서 보기