zotero

# Zotero Use this skill to operate a user's local Zotero Desktop library from Codex. Core helper: ```bash python3 <plugin-root>/skills/zotero/scripts/zotero.py <command> ``` Resolve `<plugin-root>` by going two directories up from this `SKILL.md` file. The helper is stdlib-only and follows the repo convention of running plugin Python helpers with `python3` / `#!/usr/bin/env python3`; it does not require Codex-specific runtime discovery. ## Fast starts Check readiness in one command: ```bash python3 <plugin-root>/skills/zotero/scripts/zotero.py status --json ``` Enable the local API and restart Zotero if needed: ```bash python3 <plugin-root>/skills/zotero/scripts/zotero.py enable --restart ``` Search and export citation data: ```bash python3 <plugin-root>/skills/zotero/scripts/zotero.py search "transformer" --json python3 <plugin-root>/skills/zotero/scripts/zotero.py export-bibtex --out references.bib ``` Insert a citation from Zotero into a draft and keep `references.bib` in sync: ```bash python3 <plugin-root>/skills/zotero/scripts/zotero.py cite --query "Attention Is All You Need" --tex paper.tex --bib references.bib --marker '<cite>' ``` ## Workflow 1. Start with `status --json`. Do not rediscover prefs, ports, or profile paths manually unless the helper fails. 2. If `local_api_enabled_pref` is false, run `enable --restart` when the user asked you to operate Zotero. This updates Zotero's local preference and restarts Zotero so port `23119` comes up. 3. Use read-only local API commands for normal work: - `inventory` for item/collection/tag summaries. - `search <query>` for papers/items. - `export-bibtex` or `sync-bib` for `.bib` files. - `cite` for inserting a citation into a draft. 4. Only retrieve attachment file URLs or full text when the user asks for PDFs, attachment paths, or full-text content. 5. Treat Zotero library writes as explicit write actions. Before `import-bibtex`, `import-ris`, or connector save commands, confirm the exact record/source and destination unless the user's prompt already explicitly asked to add/import it. ## Common commands ```bash # Readiness and route map python3 <plugin-root>/skills/zotero/scripts/zotero.py status --json python3 <plugin-root>/skills/zotero/scripts/zotero.py probe --json # Library inventory python3 <plugin-root>/skills/zotero/scripts/zotero.py inventory python3 <plugin-root>/skills/zotero/scripts/zotero.py collections python3 <plugin-root>/skills/zotero/scripts/zotero.py tags # Search and export python3 <plugin-root>/skills/zotero/scripts/zotero.py search "BERT" python3 <plugin-root>/skills/zotero/scripts/zotero.py export-bibtex --out references.bib python3 <plugin-root>/skills/zotero/scripts/zotero.py export-bibtex --item-key PXW99EKT python3 <plugin-root>/skills/zotero/scripts/zotero.py citations --style apa --json # Draft editing python3 <plugin-root>/skills/zotero/scripts/zotero.py cite --item-key PXW99EKT --tex paper.tex --bib references.bib --marker '<cite>' python3 <plugin-root>/skills/zotero/scripts/zotero.py cite --query "BERT" --markdown notes.md --bib references.bib --marker '<cite>' # Attachments and full text; use only on request python3 <plugin-root>/skills/zotero/scripts/zotero.py children PXW99EKT --json python3 <plugin-root>/skills/zotero/scripts/zotero.py fulltext 2JAZS9U8 --out attention-fulltext.txt python3 <plugin-root>/skills/zotero/scripts/zotero.py file-url 2JAZS9U8 # Writes to Zotero; confirm first unless explicitly requested python3 <plugin-root>/skills/zotero/scripts/zotero.py selected-target --json python3 <plugin-root>/skills/zotero/scripts/zotero.py import-bibtex --file new-reference.bib --yes python3 <plugin-root>/skills/zotero/scripts/zotero.py import-ris --file new-reference.ris --yes ``` ## Output standards - For inventory/search, return title, creators, year, Zotero item key, and BibTeX key when available. - Explain the two-key distinction when relevant: Zotero item keys like `PXW99EKT` are not the same as exported BibTeX keys like `vaswani_attention_2023`. - For `.bib` export, return the absolute output path and entry count. - For draft citation insertion, report the edited file, inserted citation key, and updated `.bib` path. - For blockers, name the exact gate: Zotero app missing, local API disabled, port closed, connector unavailable, no matching item, or write not confirmed. ## Route details Read `references/local-api-routes.md` only when you need endpoint details beyond the helper commands.