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SkillsMP 已收集 BrainStOrmics/BIA-CellHashtag 中的 12 个 Skill。打开任一 Skill 可查看来源和详情。
已展示 12 / 12 个已收集 Skill。
DAG-MCTS for cell type annotation. Search space is a DAG (Merge + ReEmbed create multi-parent nodes). Uses P-UCT selection, Soft-Bellman backprop, confidence discounting, and transposition table. Per-iteration tree viz emitted as interactive HTML.
原文语言：英语
Correct batch effects in single-cell data using Harmony, BBKNN, or ComBat.
原文语言：英语
Query CellWiki knowledge base for marker genes, cell type ontologies, and tissue-specific cell type constraints.
原文语言：英语
Find differentially expressed genes (markers) for clusters using wilcoxon, t-test, or logistic regression. Includes consensus markers and resolution scanning.
原文语言：英语
Assess single-cell clustering quality using silhouette score, modularity, and phiclust. Returns recommendations to adjust resolution or accept current clustering.
原文语言：英语
Load single-cell RNA-seq data from h5ad, rds, or 10x mtx formats into AnnData objects.
原文语言：英语
Generate publication-quality UMAP/t-SNE embedding plots with Okabe-Ito color palette. Outputs PDF+PNG.
原文语言：英语
Generate violin plots and dot plots for gene expression visualization across cell clusters.
原文语言：英语
Generate marker gene heatmaps with hierarchical clustering dendrograms.
原文语言：英语
Compute QC metrics, filter cells, detect doublets for single-cell RNA-seq data.
原文语言：英语
Load spatial transcriptomics data from 10x Visium, Nanostring MERFISH, BGI Stereo-seq, and generic spatial formats.
原文语言：英语
Infer cell trajectories using PAGA graph-based trajectory inference.
原文语言：英语