菜单
Basic rapid ribosomal RNA predictor for genomes. Use this skill when working with barrnap: installing, choosing parameters, running commands, interpreting outputs, or troubleshooting. Upstream: https://github.com/tseemann/barrnap. For stage routing use tool-selection / metagenomics-workflow.
默认使用会先检查来源的 Prompt；你也可以切换为直接命令，或下载本地副本。
决定是否安装前，请先阅读 SKILL.md，以及 SkillsMP 当前展示的配套文件。
用 Codex 或 Claude 帮你安装 复制这段 Prompt，粘贴到 Codex、Claude 或其他助手里，让它检查 Skill 页面并帮你完成安装。
直接命令不会经过审查 Prompt；运行前请先检查来源。
npx skills add https://github.com/PKU-EMBL/Metagenomics-Skills --skill barrnap命令会保持在同一行。复制前请横向滚动并检查完整内容。
想先保存到本地？可下载 SkillsMP 当前能够提供的文件。
基于 SOC 职业分类
正在显示 SKILL.md
| name | barrnap |
| description | Basic rapid ribosomal RNA predictor for genomes. Use this skill when working with barrnap: installing, choosing parameters, running commands, interpreting outputs, or troubleshooting. Upstream: https://github.com/tseemann/barrnap. For stage routing use tool-selection / metagenomics-workflow. |
| license | MIT |
| category | analysis-tools |
| tags | ["rrna","annotation"] |
| upstream | https://github.com/tseemann/barrnap |
| stage | gene |
Upstream: Barrnap
Seemann, T. Barrnap: BAsic Rapid Ribosomal RNA Predictor. https://github.com/tseemann/barrnap
See also docs/references.md.
Quick rRNA loci on MAGs/isolates for QC (16S presence) and annotation. Pair with GTDB-Tk / Prokka workflows.
conda install -c bioconda barrnap # if packaged; else follow upstream
barrnap bins/bin.fa > temp/barrnap/${id}.gff
| kingdom | bac/arc/euk | |
bakta/prokka)prokka · gtdbtk · checkm2 · tool-selection · metagenomics-workflow