openJiuwen-ai/sciencediscovery

gitcode

Operate GitCode issues, PRs, wikis, code/MR refs, and cached org templates. Use for gitcode.com, atomgit.com, GitCode issues/PRs, wiki, or /gitcode.

لغة النص الأصلي: الإنجليزية

deploy

Deploy or run the ScienceDiscovery stack, either as host processes (scripts/start-stack.sh) or with Docker Compose. Use when the user asks to deploy, start, run, or containerize ScienceDiscovery, or asks for the UI URL, SSH port forwarding, or…

لغة النص الأصلي: الإنجليزية

e2e-testing

Write, group, select, and run browser E2E tests for ScienceDiscovery (Playwright specs in test/). Use when adding or changing an E2E spec, filtering E2E CI cases by environment tags, running the mocked or real E2E group, isolating a test stack (worktree,…

لغة النص الأصلي: الإنجليزية

antibody-protenix-pipeline

Prepare, submit, monitor, and summarize the real RFdiffusion to ProteinMPNN to Protenix antibody pipeline through the ScienceDiscovery Runner NPU Broker, including custom workspace-local antigen PDBs and chain-labelled epitopes.

لغة النص الأصلي: الإنجليزية

citation-reviewer

Verify cited paper identity and decide whether claims in an Artifact are supported by their linked Evidence using a governed source snapshot.

لغة النص الأصلي: الإنجليزية

code-engineer

Use this skill when you need to write and execute Python/R code to process, transform, and analyze data, delivering reproducible computational results with complete code-level methodology documentation. Supports statistical analysis, data transformation,…

لغة النص الأصلي: الإنجليزية

computation-reviewer

Check whether numeric claims marked with Evidence aliases in an Artifact agree with the linked Evidence content and context.

لغة النص الأصلي: الإنجليزية

evidence-extractor

Use this skill when a research workflow needs source-grounded evidence extraction from a `literature_sources.json` package or compatible source list. Produces an integration-ready evidence package with claims, evidence, citations, confidence/strength labels,…

لغة النص الأصلي: الإنجليزية

life-science-evidence-brief

Research scientific questions with enabled literature and database connectors, distinguish curated annotations from paper evidence, and produce a cautious claim-to-source brief. Use for gene/protein function summaries, literature scans, evidence tables, paper…

لغة النص الأصلي: الإنجليزية

literature-searcher

Use this skill when a research workflow needs verified academic source retrieval through literature-search MCP interfaces available in the current session before evidence extraction. Discovers and selects relevant interfaces adaptively, then produces…

لغة النص الأصلي: الإنجليزية

report-writer

Receives Domain Summaries (Knowledge Summary, Analysis Summary, or both) from the science-research-team orchestrator, performs cross-domain synthesis (identifying SUPPORTS/CONTRADICTS/INFORMS/INDEPENDENT connections), surfaces contradictions verbatim, and…

لغة النص الأصلي: الإنجليزية

result-evaluator

Evaluate analysis results for quality and reliability. Scores Accuracy, Completeness, Robustness, and Relevance (0-10), checks source reliability and methodology, audits statistical rigor, and decides ACCEPT_AND_PROCEED or REVISE_AND_RETRY. NOT for performing…

لغة النص الأصلي: الإنجليزية

science-research-team

Use this skill to orchestrate a multi-domain research team for literature/evidence research and data analysis. Dispatches the right domain(s) based on the user's request, runs each domain to completion with its own loop, then synthesizes into reports. Load…

لغة النص الأصلي: الإنجليزية

structure-pocket-inspection

Inspect a local PDB structure, summarize chains and residue composition, and identify protein atoms near a user-specified ligand or pocket center. Use for reproducible first-pass structure and binding-site inspection before heavier modeling.

لغة النص الأصلي: الإنجليزية