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ma-compbio-lab
GitHub-Creator-Profil

ma-compbio-lab

Repository-Ansicht von 39 gesammelten Skills in 1 GitHub-Repositories.

gesammelte Skills
39
Repositories
1
aktualisiert
2026-04-05
Repository-Explorer

Repositories und repräsentative Skills

clinicaltrials-study-search
Datenwissenschaftler

Use this skill to search the current ClinicalTrials.gov v2 API for condition or keyword matches when you need official clinical-study metadata. Do not use it for legacy API URLs or offline work.

2026-04-05
ensembl-gene-lookup
Sonstige Biowissenschaftler

Use this skill to resolve a gene symbol to Ensembl IDs and fetch a canonical Ensembl gene record. Do not use it for full transcript annotation pipelines or offline work.

2026-04-05
ncbi-gene-search
Sonstige Biowissenschaftler

Use this skill to search NCBI Gene by symbol and organism, then fetch compact official Entrez Gene summaries. Do not use it for variant interpretation, transcript-level modeling, or bulk offline annotation.

2026-04-05
cwl-commandlinetool-starter
Softwareentwickler

Use this skill to author and run a minimal Common Workflow Language CommandLineTool and one-step workflow with cwltool. Do not use it for containerized production execution or complex scatter/gather workflows.

2026-04-05
nextflow-hello-workflow
Softwareentwickler

Use this skill to run a minimal Nextflow workflow through the repo-managed Java and Nextflow prefix, either locally or on the Slurm cluster. Do not use it for containerized production pipelines.

2026-04-05
nf-core-pipeline-list
Softwareentwickler

Use this skill to verify the repo-managed nf-core tools install and retrieve a cleaned summary of available pipelines. Do not use it for interactive launch flows or full pipeline downloads.

2026-04-05
snakemake-toy-workflow-starter
Softwareentwickler

Use this skill to run a tiny Snakemake workflow through the repo-managed Snakemake prefix and inspect deterministic toy outputs.

2026-04-05
wdl-task-starter
Softwareentwickler

Use this skill to author and run a minimal WDL task and workflow with miniwdl. Do not use it for Cromwell-specific backends or large imported workflow graphs.

2026-04-05
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