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crossref-metadata-search

Use this skill to search Crossref metadata when you need DOI-oriented citation records from the official REST API. Do not use it when you need full text or publisher-specific access controls.

Quellinformationen

Repository
ma-compbio-lab/SkillFoundry
Letzte Quellaktivität
2. April 2026 um 20:49
Erkannte Sprache von SKILL.md
Englisch
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41
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4

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Lesen Sie SKILL.md und alle von SkillsMP angezeigten Begleitdateien, bevor Sie sich für eine Installation entscheiden.

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SKILL.md
Quellanweisungen · Schreibgeschützte Vorschau
name
crossref-metadata-search
description
Use this skill to search Crossref metadata when you need DOI-oriented citation records from the official REST API. Do not use it when you need full text or publisher-specific access controls.
## Purpose Search Crossref works metadata and save a structured JSON result set for citation discovery and DOI lookup. ## When to use - You need DOI-rich bibliographic metadata. - You want a publisher-agnostic metadata pass to complement OpenAlex or PubMed. ## When not to use - You need article full text. - You need biomedical indexing fields unique to PubMed or Europe PMC. ## Inputs - Title or topic query - Optional `--rows` and `--out` ## Outputs - Crossref `work-list` JSON payload ## Requirements - Python 3.13+ - Network access to `api.crossref.org` ## Procedure 1. Run `python3 skills/scientific-knowledge/crossref-metadata-search/scripts/search_crossref.py --query-title "single-cell RNA-seq" --rows 3 --out skills/scientific-knowledge/crossref-metadata-search/assets/crossref_single_cell.json`. 2. Inspect `message.total-results` and `message.items`. 3. Use returned DOIs as anchors for follow-up literature or provenance work. ## Validation - Command exits successfully. - Output JSON contains `message-type` equal to `work-list`. - At least one item is returned for a common topic. ## Failure modes and fixes - Empty results: simplify the title query. - Rate or service issues: retry with smaller `--rows` and a descriptive user agent. ## Safety and limits - Metadata only; access to full content depends on publishers. - Respect Crossref polite-use expectations. ## Examples - `python3 .../search_crossref.py --query-title "spatial transcriptomics" --rows 2` ## Provenance - Crossref REST API docs: https://www.crossref.org/documentation/retrieve-metadata/rest-api/ ## Related skills - `openalex-literature-search` - `ncbi-pubmed-search`
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