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SkillsMP a collecté 11 skills depuis Sun-Lab-NBB/cindra. Ouvrez un skill pour examiner sa source et ses détails.
Affichage de 11 skills collectés sur 11.
Guides agents through preparing raw imaging data for cindra processing. Covers creating and validating cindra_parameters.json acquisition parameter files, gathering acquisition metadata from users, converting data from common microscope formats into…
Langue du texte source : anglais
Orchestrates the cindra neural imaging pipeline end to end and serves as the entry point for cindra work. Covers canonical stage ordering with handoff conditions for the single-recording and multi-recording pipelines, the single-vs-multi-recording decision,…
Langue du texte source : anglais
Documents the human-facing cindra and cindra-gui command-line interfaces. Covers every command and option with its short form, long form, type, default, and effect, the MCP tool each command maps to, its failure modes, and how the CLI path diverges from the…
Langue du texte source : anglais
Complete reference for multi-recording pipeline configuration parameters, prerequisites, and MCP configuration tools. Documents all 7 configuration sections, parameter meanings, default values, prerequisites from single-recording processing, and available MCP…
Langue du texte source : anglais
Orchestrates multi-recording neural imaging batch processing via the cindra MCP server, dispatching to configuration and results skills as needed. Use when the user asks to run multi-recording (cross-day ROI tracking) processing, process multiple recordings…
Langue du texte source : anglais
Complete reference for multi-recording pipeline output data formats. Documents every file, directory, array shape, dtype, and NPZ key produced by the pipeline, plus verification checklists for output completeness. Use when evaluating multi-recording…
Langue du texte source : anglais
Complete reference for single-recording pipeline configuration parameters and MCP configuration tools. Documents all 9 configuration sections, parameter meanings, default values, and available MCP tools for generating configurations and discovering…
Langue du texte source : anglais
Orchestrates single-recording neural imaging batch processing via the cindra MCP server, dispatching to acquisition-preparation, configuration, and results skills as needed. Use when the user asks to process single-recording imaging data, run the…
Langue du texte source : anglais
Complete reference for single-recording pipeline output data formats. Documents every file, directory, array shape, dtype, and NPZ key produced by the pipeline, plus verification checklists for output completeness. Use when evaluating single-recording…
Langue du texte source : anglais
Launches and manages cindra GUI viewers for visual inspection of processing results, queries live viewer display state, and guides users through viewer interactions. Covers ROI, tracking, and registration viewers via the cindra-gui MCP server. Use when the…
Langue du texte source : anglais
Diagnoses and resolves cindra and cindra-gui MCP server connectivity issues. Covers environment verification, command availability, Python version checks, dependency validation, and conda/pip/uv environment configuration. Use when the cindra or cindra-gui MCP…
Langue du texte source : anglais