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SkillsMP hat 11 Skills aus Sun-Lab-NBB/cindra gesammelt. Öffne einen Skill, um Quelle und Details zu prüfen.
Es werden 11 von 11 gesammelten Skills angezeigt.
Guides agents through preparing raw imaging data for cindra processing. Covers creating and validating cindra_parameters.json acquisition parameter files, gathering acquisition metadata from users, converting data from common microscope formats into…
Quellsprache: Englisch
Orchestrates the cindra neural imaging pipeline end to end and serves as the entry point for cindra work. Covers canonical stage ordering with handoff conditions for the single-recording and multi-recording pipelines, the single-vs-multi-recording decision,…
Quellsprache: Englisch
Documents the human-facing cindra and cindra-gui command-line interfaces. Covers every command and option with its short form, long form, type, default, and effect, the MCP tool each command maps to, its failure modes, and how the CLI path diverges from the…
Quellsprache: Englisch
Complete reference for multi-recording pipeline configuration parameters, prerequisites, and MCP configuration tools. Documents all 7 configuration sections, parameter meanings, default values, prerequisites from single-recording processing, and available MCP…
Quellsprache: Englisch
Orchestrates multi-recording neural imaging batch processing via the cindra MCP server, dispatching to configuration and results skills as needed. Use when the user asks to run multi-recording (cross-day ROI tracking) processing, process multiple recordings…
Quellsprache: Englisch
Complete reference for multi-recording pipeline output data formats. Documents every file, directory, array shape, dtype, and NPZ key produced by the pipeline, plus verification checklists for output completeness. Use when evaluating multi-recording…
Quellsprache: Englisch
Complete reference for single-recording pipeline configuration parameters and MCP configuration tools. Documents all 9 configuration sections, parameter meanings, default values, and available MCP tools for generating configurations and discovering…
Quellsprache: Englisch
Orchestrates single-recording neural imaging batch processing via the cindra MCP server, dispatching to acquisition-preparation, configuration, and results skills as needed. Use when the user asks to process single-recording imaging data, run the…
Quellsprache: Englisch
Complete reference for single-recording pipeline output data formats. Documents every file, directory, array shape, dtype, and NPZ key produced by the pipeline, plus verification checklists for output completeness. Use when evaluating single-recording…
Quellsprache: Englisch
Launches and manages cindra GUI viewers for visual inspection of processing results, queries live viewer display state, and guides users through viewer interactions. Covers ROI, tracking, and registration viewers via the cindra-gui MCP server. Use when the…
Quellsprache: Englisch
Diagnoses and resolves cindra and cindra-gui MCP server connectivity issues. Covers environment verification, command availability, Python version checks, dependency validation, and conda/pip/uv environment configuration. Use when the cindra or cindra-gui MCP…
Quellsprache: Englisch