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O SkillsMP coletou 11 skills de Sun-Lab-NBB/cindra. Abra uma skill para revisar a origem e os detalhes.
Mostrando 11 de 11 skills coletadas.
Guides agents through preparing raw imaging data for cindra processing. Covers creating and validating cindra_parameters.json acquisition parameter files, gathering acquisition metadata from users, converting data from common microscope formats into…
Idioma do texto original: inglês
Orchestrates the cindra neural imaging pipeline end to end and serves as the entry point for cindra work. Covers canonical stage ordering with handoff conditions for the single-recording and multi-recording pipelines, the single-vs-multi-recording decision,…
Idioma do texto original: inglês
Documents the human-facing cindra and cindra-gui command-line interfaces. Covers every command and option with its short form, long form, type, default, and effect, the MCP tool each command maps to, its failure modes, and how the CLI path diverges from the…
Idioma do texto original: inglês
Complete reference for multi-recording pipeline configuration parameters, prerequisites, and MCP configuration tools. Documents all 7 configuration sections, parameter meanings, default values, prerequisites from single-recording processing, and available MCP…
Idioma do texto original: inglês
Orchestrates multi-recording neural imaging batch processing via the cindra MCP server, dispatching to configuration and results skills as needed. Use when the user asks to run multi-recording (cross-day ROI tracking) processing, process multiple recordings…
Idioma do texto original: inglês
Complete reference for multi-recording pipeline output data formats. Documents every file, directory, array shape, dtype, and NPZ key produced by the pipeline, plus verification checklists for output completeness. Use when evaluating multi-recording…
Idioma do texto original: inglês
Complete reference for single-recording pipeline configuration parameters and MCP configuration tools. Documents all 9 configuration sections, parameter meanings, default values, and available MCP tools for generating configurations and discovering…
Idioma do texto original: inglês
Orchestrates single-recording neural imaging batch processing via the cindra MCP server, dispatching to acquisition-preparation, configuration, and results skills as needed. Use when the user asks to process single-recording imaging data, run the…
Idioma do texto original: inglês
Complete reference for single-recording pipeline output data formats. Documents every file, directory, array shape, dtype, and NPZ key produced by the pipeline, plus verification checklists for output completeness. Use when evaluating single-recording…
Idioma do texto original: inglês
Launches and manages cindra GUI viewers for visual inspection of processing results, queries live viewer display state, and guides users through viewer interactions. Covers ROI, tracking, and registration viewers via the cindra-gui MCP server. Use when the…
Idioma do texto original: inglês
Diagnoses and resolves cindra and cindra-gui MCP server connectivity issues. Covers environment verification, command availability, Python version checks, dependency validation, and conda/pip/uv environment configuration. Use when the cindra or cindra-gui MCP…
Idioma do texto original: inglês