rnaseq-plot
Use when the user already has an RNA-seq count or expression matrix and needs downstream plots or analysis (normalize, PCA, DESeq2/edgeR/limma, volcano, heatmap, GO/KEGG, GSEA, WGCNA). Call the rnaseq-plot MCP tools named rgraph_*; do not redraw in Python.
来源信息
- 仓库
- MiniMax-AI/MiniMax-Code-Plugins
- 最近来源活动
- 2026年8月25日 02:52
- 检测到的 SKILL.md 语言
- 英语
- 星标
- 11
- 分支
- 10
安装方式
默认使用会先检查来源的 Prompt；你也可以切换为直接命令，或下载本地副本。
检查来源文件
决定是否安装前，请先阅读 SKILL.md，以及 SkillsMP 当前展示的配套文件。
正在显示 SKILL.md
SKILL.md
来源说明 · 只读预览- name
- rnaseq-plot
- description
- Use when the user already has an RNA-seq count or expression matrix and needs downstream plots or analysis (normalize, PCA, DESeq2/edgeR/limma, volcano, heatmap, GO/KEGG, GSEA, WGCNA). Call the rnaseq-plot MCP tools named rgraph_*; do not redraw in Python.
# rnaseq-plot
Use the `rnaseq-plot` MCP server. Tool functions are still named `rgraph_*`. Prefer R-rendered png+pdf over matplotlib copies.
## Typical order
1. `rgraph_env` — confirm Rscript and packages
2. `rgraph_normalize` / `rgraph_pca` / `rgraph_correlation` as needed
3. `rgraph_diff` — default significance metric is **padj**, not raw p-value
4. `rgraph_volcano`, `rgraph_heatmap`, `rgraph_enrich`, `rgraph_gsea`, `rgraph_wgcna` as requested
Required table columns are in the Plugin README (`sample_name`/`group`, `gene_id`, counts).
If Rscript is missing, return the generated `.R` script and the command to run it. If a package is missing, return the install hint from the tool. Do not pretend the figure was drawn.
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