Menú
Skills en este repositorio
SkillsMP ha recopilado 420 skills de eightmm/codex-science. Abre una skill para revisar su origen y sus detalles.
eightmm/codex-scienceMostrando 40 de 420 skills recopiladas.
Synthesize public cancer genomic alterations across genes, cohorts, molecular profiles, clinical annotations, and literature. Use for somatic landscape, biomarker, resistance, or translational oncology research.
Idioma del texto original: inglés
Resolve cancer genes and plan public cBioPortal cohort queries. Use for somatic alteration, cancer cohort, co-alteration, survival, or translational oncology evidence.
Idioma del texto original: inglés
Resolve chemical entities, ontology identifiers, formulae, and structures through ChEBI. Use before chemistry, metabolite, reaction, or pharmacology workflows when names or identifiers are ambiguous.
Idioma del texto original: inglés
Reconcile gene expression across GTEx, Human Protein Atlas, Bgee, cell atlases, and disease datasets. Use for tissue, cell-type, developmental, baseline-versus-disease, or target-expression questions.
Idioma del texto original: inglés
Assess rare-variant gene burden evidence with explicit cohort, ancestry, mask, frequency threshold, model, phenotype, and multiple-testing semantics. Use for gene-level human genetic support and locus-to-gene follow-up.
Idioma del texto original: inglés
Resolve traits and discover curated human genetic association evidence with GWAS Catalog REST API v2. Use for trait, locus, variant, ancestry, study, and locus-to-gene research.
Idioma del texto original: inglés
Integrate public metabolite, reaction, protein, proteomics, and study evidence. Use for pathway mechanism, biomarker context, multi-omics follow-up, or dataset selection.
Idioma del texto original: inglés
Discover public microbiome and metagenomics studies through MGnify. Use for biome, sample, assembly, taxonomic, functional, or public microbiome dataset questions.
Idioma del texto original: inglés
Normalize human gene symbols and aliases to Entrez, Ensembl, and taxonomic identifiers with MyGene.info. Use before cross-database gene, target, expression, or variant research when identifiers are incomplete or inconsistent.
Idioma del texto original: inglés
Resolve human genes through NCBI Entrez Gene and preserve links to sequence, literature, variation, and GEO resources. Use for NCBI-centered gene and identifier research.
Idioma del texto original: inglés
Run bounded NCBI-centered research across Gene, PubMed/PMC, sequence, variation, and GEO-linked records. Use when a gene, accession, sequence, or literature question requires traceable NCBI cross-links.
Idioma del texto original: inglés
Compare one normalized variant across FinnGen, BioBank Japan, and UKB/TOPMed PheWAS evidence. Use for phenotype-wide replication, ancestry heterogeneity, pleiotropy screening, or cohort comparison.
Idioma del texto original: inglés
Discover public proteomics projects through PRIDE Archive. Use for mass-spectrometry datasets, reanalysis candidates, protein evidence, or public-study discovery.
Idioma del texto original: inglés
Resolve a known PXD accession through ProteomeXchange. Use for cross-repository accession verification and proteomics reanalysis planning; use PRIDE for keyword discovery.
Idioma del texto original: inglés
Search curated biochemical reactions and participants through Rhea. Use for enzyme, pathway, metabolite, reaction-direction, or mechanism context.
Idioma del texto original: inglés
Resolve non-coding RNA identifiers, sequences, types, and cross-references through RNAcentral. Use for RNA annotation, accession normalization, ncRNA, or sequence-context research.
Idioma del texto original: inglés
Find ontology-aware healthy wild-type gene expression context with Bgee. Use for cross-species, anatomical, developmental-stage, or baseline-expression questions.
Idioma del texto original: inglés
Normalize genes, proteins, variants, diseases, phenotypes, compounds, reactions, tissues, cell types, organisms, studies, and accessions before multi-source biomedical research. Use whenever aliases, assemblies, releases, or identifier namespaces could change…
Idioma del texto original: inglés
Reconcile conflicting multi-source biomedical evidence with explicit entity, release, cohort, assay, independence, and claim semantics. Use before final conclusions from multiple databases or evidence lanes.
Idioma del texto original: inglés
Discover public life-science studies and associated archive records through EMBL-EBI BioStudies. Use for ArrayExpress, supplementary-data, accession, and public dataset discovery.
Idioma del texto original: inglés
Synthesize public cancer genomic alterations across genes, cohorts, molecular profiles, clinical annotations, and literature. Use for somatic landscape, biomarker, resistance, or translational oncology research.
Idioma del texto original: inglés
Resolve cancer genes and plan public cBioPortal cohort queries. Use for somatic alteration, cancer cohort, co-alteration, survival, or translational oncology evidence.
Idioma del texto original: inglés
Resolve chemical entities, ontology identifiers, formulae, and structures through ChEBI. Use before chemistry, metabolite, reaction, or pharmacology workflows when names or identifiers are ambiguous.
Idioma del texto original: inglés
Reconcile gene expression across GTEx, Human Protein Atlas, Bgee, cell atlases, and disease datasets. Use for tissue, cell-type, developmental, baseline-versus-disease, or target-expression questions.
Idioma del texto original: inglés
Assess rare-variant gene burden evidence with explicit cohort, ancestry, mask, frequency threshold, model, phenotype, and multiple-testing semantics. Use for gene-level human genetic support and locus-to-gene follow-up.
Idioma del texto original: inglés
Resolve traits and discover curated human genetic association evidence with GWAS Catalog REST API v2. Use for trait, locus, variant, ancestry, study, and locus-to-gene research.
Idioma del texto original: inglés
Route broad or multi-step life-science questions into normalized entities, the smallest independent evidence lanes, reproducible retrieval, conflict reconciliation, and review. Use for target, variant, disease, omics, structure, pharmacology, clinical, or…
Idioma del texto original: inglés
Prioritize candidate genes at human genetic loci using curated association, credible-set/L2G, colocalization, eQTL, coding, burden, expression, and pathway evidence. Use for GWAS follow-up and target prioritization.
Idioma del texto original: inglés
Integrate public metabolite, reaction, protein, proteomics, and study evidence. Use for pathway mechanism, biomarker context, multi-omics follow-up, or dataset selection.
Idioma del texto original: inglés
Discover public microbiome and metagenomics studies through MGnify. Use for biome, sample, assembly, taxonomic, functional, or public microbiome dataset questions.
Idioma del texto original: inglés
Normalize human gene symbols and aliases to Entrez, Ensembl, and taxonomic identifiers with MyGene.info. Use before cross-database gene, target, expression, or variant research when identifiers are incomplete or inconsistent.
Idioma del texto original: inglés
Resolve human genes through NCBI Entrez Gene and preserve links to sequence, literature, variation, and GEO resources. Use for NCBI-centered gene and identifier research.
Idioma del texto original: inglés
Run bounded NCBI-centered research across Gene, PubMed/PMC, sequence, variation, and GEO-linked records. Use when a gene, accession, sequence, or literature question requires traceable NCBI cross-links.
Idioma del texto original: inglés
Compare one normalized variant across FinnGen, BioBank Japan, and UKB/TOPMed PheWAS evidence. Use for phenotype-wide replication, ancestry heterogeneity, pleiotropy screening, or cohort comparison.
Idioma del texto original: inglés
Discover public proteomics projects through PRIDE Archive. Use for mass-spectrometry datasets, reanalysis candidates, protein evidence, or public-study discovery.
Idioma del texto original: inglés
Resolve a known PXD accession through ProteomeXchange. Use for cross-repository accession verification and proteomics reanalysis planning; use PRIDE for keyword discovery.
Idioma del texto original: inglés
Discover and triage reusable public transcriptomics, proteomics, metabolomics, microbiome, and supplementary-study datasets. Use when a research question needs external data rather than only literature.
Idioma del texto original: inglés
Search curated biochemical reactions and participants through Rhea. Use for enzyme, pathway, metabolite, reaction-direction, or mechanism context.
Idioma del texto original: inglés
Resolve non-coding RNA identifiers, sequences, types, and cross-references through RNAcentral. Use for RNA annotation, accession normalization, ncRNA, or sequence-context research.
Idioma del texto original: inglés
Synthesize target, ligand, mechanism, exposure, safety, pharmacogenomic, trial, and regulatory evidence for translational pharmacology questions. Use for target-drug-indication landscapes, not prescribing.
Idioma del texto original: inglés