microbe
Use when the user has a 16S or ITS feature table plus taxonomy and metadata and needs alpha/beta diversity, composition bars, differential abundance, co-occurrence networks, random-forest biomarkers, or a taxonomy tree. Drive the microbe MCP tools with local Rscript.
来源信息
- 仓库
- MiniMax-AI/MiniMax-Code-Plugins
- 最近来源活动
- 2026年8月25日 02:52
- 检测到的 SKILL.md 语言
- 英语
- 星标
- 18
- 分支
- 13
安装方式
默认使用会先检查来源的 Prompt；你也可以切换为直接命令，或下载本地副本。
检查来源文件
决定是否安装前，请先阅读 SKILL.md，以及 SkillsMP 当前展示的配套文件。
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SKILL.md
来源说明 · 只读预览- name
- microbe
- description
- Use when the user has a 16S or ITS feature table plus taxonomy and metadata and needs alpha/beta diversity, composition bars, differential abundance, co-occurrence networks, random-forest biomarkers, or a taxonomy tree. Drive the microbe MCP tools with local Rscript.
# microbe
Use the `microbe` MCP tools. Do not reimplement vegan/DESeq2 plots in Python.
## Typical order
1. `microbe_env`
2. `microbe_alpha`, `microbe_beta`
3. `microbe_composition`, `microbe_diff`
4. `microbe_network`, `microbe_rf`, `microbe_corr`, `microbe_tree` as requested
Expected columns: `feature_id` + sample counts; taxonomy ranks or a QIIME semicolon string; `sample_name` + `group`.
Missing R or packages: return the tool's repair command. This Plugin does not go from raw reads to ASVs.
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